KEGG   Xiphophorus maculatus (southern platyfish): 102223797
Entry
102223797         CDS       T02923                                 
Name
(RefSeq) thrombospondin-4-B-like
  KO
K04659  thrombospondin 2/3/4/5
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma04145  Phagosome
xma04510  Focal adhesion
xma04512  ECM-receptor interaction
xma04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:xma00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102223797
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    102223797
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102223797
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102223797
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xma04131]
    102223797
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xma04147]
    102223797
   00536 Glycosaminoglycan binding proteins [BR:xma00536]
    102223797
Membrane trafficking [BR:xma04131]
 Endocytosis
  Phagocytosis
   Opsonins
    102223797
Exosome [BR:xma04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   102223797
  Exosomal proteins of colorectal cancer cells
   102223797
  Exosomal proteins of bladder cancer cells
   102223797
Glycosaminoglycan binding proteins [BR:xma00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   102223797
SSDB
Motif
Pfam: TSP_C TSP_3 COMP EGF_CA EGF_3 EGF cEGF EGF_MSP1_1
Other DBs
NCBI-GeneID: 102223797
NCBI-ProteinID: XP_014324125
Ensembl: ENSXMAG00000005071
Position
8:18655962..18672973
AA seq 941 aa
MILWTFFILLSQLLLNLCLHAEAQALAVYNLLTSPDCLPDLLQGGLAEQGVNEAFILTTF
KLQPKTGTTLFGLFNPRDNSKYFEFTVMGKLNRAVLRYLRTDKRMSSVSFNNLVLADGQQ
HRLLFHLKGLQQQGPGGVELHLDCRLVETVRDLPAVFQGLPAGYGMVELKTMQARDQESL
DELKLVVGDSFENVASLQDCHFQQRDSVQTLGVNTKQLSNQMLELTKVINELKDVLIQQV
KETSFLRNTISECQACGLGGTEVVKPRCAPGVCFRDDMCIETANGVECAPCPDGYTGDGF
NCDDVDECQFNPCFPGVKCVNTAPGFRCDACPLGYVGLPVEGVGILFAQTNKQVCDDIDE
CKGPDNGGCTANSICHNSVGSFYCGSCKTGFTGDQVRGCEPELSCANSLTNPCDINAECI
RERDGTISCQCGIGWAGNGYLCGKDTDIDGYPDEKLKCKDANCRKDNCIFVPNSGQEDAD
RDGQGDACDDDADGDGIPNEQDNCRLKPNVDQRNSDADSHGDACDNCRMVSNPDQRDTDG
DGKGDACDDDMDGDGVRNFLDNCQRVQNRDQLDRDGDGVGDACDSCPDIPNPNQSDVDND
LVGDSCDTNQDSDGDGHQDTKDNCPLVINSSQQDTDKDGLGDECDDDDDNDGIPDILPPG
PDNCRLVPNPDQIDDNNDGVGDICESDFDQDKVIDRIDNCPENAEVTLTDFRAYQTVVLD
PEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTVTDDDYAGFI
FGYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVKSRSGPGEHLRNSLWHTGDT
NDQVRLLWKDPRNVGWKDKVSYRWYLQHRPQVGYIRVRFYEGTQLVADSGVTIDTTMRGG
RLGVFCFSQENIIWSNLKYRCNDTIPEDFQEFSAQHTVDSI
NT seq 2826 nt   +upstreamnt  +downstreamnt
atgattttgtggacattcttcattctgctctcgcagctgttattaaacctgtgcttacat
gcagaggcccaggctttggcagtctacaatctgctcacctcgcctgactgcttgccagac
ctgctgcagggaggtttggcagaacaaggggtgaacgaggctttcatcttaaccaccttc
aagctgcagcccaagactggaaccacactgtttggcctgttcaacccaagggacaacagc
aagtattttgagttcaccgtaatggggaaactcaaccgggctgtgttacgttacttgcgg
actgacaagagaatgagctctgttagcttcaacaaccttgtgctggcggacggccagcag
caccggctgttgttccacctgaagggtctgcagcagcaggggccaggcggggtggagcta
catctggactgcaggctggttgagacggtccgggatcttcctgccgtcttccagggtttg
ccagcagggtacggcatggtggagctaaagacaatgcaagccagggatcaggagagctta
gacgagctgaaactggtggttggggactcgtttgagaatgttgcatcattgcaagactgt
cattttcagcaaagagattcggttcaaactttaggggtcaacacaaagcagctgtcaaat
caaatgctggagttaacaaaggtgataaacgagcttaaagacgttctcatccagcaggtt
aaggaaacatcttttctccgaaacactatttcagagtgtcaggcttgtggtctgggtgga
acagaggtggtgaaaccgagatgtgctcctggtgtctgtttccgcgatgatatgtgcatt
gagacagcaaatggcgtggagtgtgcaccctgtcctgatgggtacactggagatggcttc
aactgtgatgatgttgatgagtgccagtttaacccctgcttccctggagtgaagtgcgtt
aacactgcccctggcttccgctgcgacgcctgcccgctgggttacgtcggcctgccagtg
gagggtgtgggcattttgttcgctcaaaccaacaaacaggtctgcgatgacattgatgaa
tgcaaaggacccgacaatggtggctgtactgcaaactcaatctgtcacaactctgtgggc
tccttttactgtggcagctgtaagactgggttcacaggagatcaggtgaggggctgtgag
ccagagctcagctgtgcaaacagcctgaccaacccctgcgacatcaacgccgagtgcatt
cgagaaagagatggcactatttcttgtcagtgtggaattggctgggcgggcaacggatac
ctgtgtgggaaagacacggacattgatggatacccggatgaaaaactcaagtgcaaggac
gcaaactgtagaaaggataattgcatctttgttcctaactctggtcaagaggacgctgac
agggatggccagggagacgcctgtgatgacgatgcagatggtgacggtattcccaatgag
caggacaactgccggttgaagcccaacgtggatcagaggaacagtgatgcagacagccat
ggcgatgcctgtgacaactgtcgtatggtgagcaatcccgaccagcgggacactgacgga
gacggcaaaggagatgcctgcgacgatgacatggacggagacggtgtgagaaatttcctg
gacaactgccagcgtgtccagaacagagaccagctggacagggatggagacggtgtggga
gatgcttgcgacagctgccctgacatccccaacccaaaccagtctgatgttgataatgac
ctggttggagactcgtgcgacacaaaccaagacagcgatggcgatggtcaccaggatacc
aaggacaattgtccactagtgattaacagctcacagcaggacacagacaaagacgggctg
ggagacgaatgtgacgatgatgatgacaatgacgggatcccagatattctaccgccagga
ccagacaactgcaggctggtgcccaaccccgaccagatcgatgacaacaatgatggcgtt
ggagatatctgcgagtccgactttgaccaggacaaagtgattgaccggattgacaattgc
cctgagaatgcagaggtcaccctgacagacttcagggcctaccagacagtggtgctggac
ccggagggagatgcacagatcgaccccaactgggttgtcctcaaccagggaatggaaata
gttcagaccatgaacagtgaccctggacttgctgttggatacactgctttcagtggagtc
gactttgaggggacttttcacgtgaacacggttaccgacgacgactatgccggcttcatc
tttggctaccaggactcgtcgtccttctatgtggtgatgtggaagcagactgagcagact
tactggcaggcaacccctttcagagctgtggccgagccaggcatccagcttaaggctgta
aagtccaggtcaggccctggggaacacttgagaaactcactgtggcacacaggagacacc
aacgaccaggtccgtctgctgtggaaggacccgaggaacgttggctggaaggacaaagtt
tcctaccgctggtatttgcagcaccgtccacaggttggatacatcagagtgaggttttac
gagggaactcagctggttgcagattctggtgtgactatcgacacaaccatgagaggagga
cgactcggcgtgttctgcttctcacaagaaaacatcatctggtccaatctgaaatatcgc
tgcaacgacaccatcccagaggatttccaggagttcagcgctcaacacaccgttgactca
atctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (43)   

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