KEGG   Xiphophorus maculatus (southern platyfish): 102226094
Entry
102226094         CDS       T02923                                 
Symbol
sap18
Name
(RefSeq) histone deacetylase complex subunit SAP18
  KO
K14324  histone deacetylase complex subunit SAP18
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma03013  Nucleocytoplasmic transport
xma03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:xma00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102226094 (sap18)
   03015 mRNA surveillance pathway
    102226094 (sap18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xma03019]
    102226094 (sap18)
   03036 Chromosome and associated proteins [BR:xma03036]
    102226094 (sap18)
Messenger RNA biogenesis [BR:xma03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     102226094 (sap18)
Chromosome and associated proteins [BR:xma03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     102226094 (sap18)
SSDB
Motif
Pfam: SAP18
Other DBs
NCBI-GeneID: 102226094
NCBI-ProteinID: XP_005813373
Ensembl: ENSXMAG00000015317
UniProt: A0A3B5R382
Position
24:complement(10162407..10164801)
AA seq 153 aa
MALESRITQEEIKKEPEKPIDREKTCPLLLRVFTTNSGRHHRSDEFARGNVPSSELQIYT
WMDATLKELTSLVKEVYPEARKKGTHFSFAIVFPDLRVKMYKLKEIGSTVSGRKGLDDAM
TLQSQRFQIGDYLDIAITPPNRAPPLNTRMRPF
NT seq 462 nt   +upstreamnt  +downstreamnt
atggcgcttgaatcgcggattacacaggaggaaataaagaaggagccagagaaacccatc
gatcgggaaaagacttgcccccttctcctgcgagtatttaccaccaacagtgggcgacac
cacagatcagacgaatttgctcggggcaatgtgccctccagtgagctccagatatacaca
tggatggatgctacattgaaggagcttaccagtttagtaaaggaagtgtatccagaagcc
aggaaaaaggggactcacttcagttttgccattgtcttccctgatctgagagtaaagatg
tacaagttgaaggagatcggcagcactgtgtctgggaggaaaggcctggatgacgccatg
acgctgcagtctcagcgtttccagatcggagactacctggatatagccatcacgccgccc
aacagagcgccgcccctcaacacgcgcatgaggcctttctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system