KEGG   Xiphophorus maculatus (southern platyfish): 102227048
Entry
102227048         CDS       T02923                                 
Symbol
nup50
Name
(RefSeq) nuclear pore complex protein Nup50
  KO
K14295  nuclear pore complex protein Nup50
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:xma00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102227048 (nup50)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xma03019]
    102227048 (nup50)
Messenger RNA biogenesis [BR:xma03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102227048 (nup50)
SSDB
Motif
Pfam: NUP50 Ran_BP1
Other DBs
NCBI-GeneID: 102227048
NCBI-ProteinID: XP_005812302
Ensembl: ENSXMAG00000010312
UniProt: M4A786
Position
17:2923070..2928620
AA seq 446 aa
MAKRIADKELTDRNWDLEEEGEEAGTFSVASEDVLKSRAIKKAKRRNTGGESEGGGAFKG
FKGFSMATSSTTPSSSLTAFSGFGGTGSFKGFGGLSNGTGSTASFGGFPSAAKAGVAFNG
PSSAQPGTDIVAQQTNGSAPGPSPAPCSRSREYSRQLTALNQSVRDWISKHVNDNPLCDL
NPIFRDYERHLASIERQYGASAEETQQGDASTPPPPAPSSSSSSSSVALFSFSKTSTEDL
GQKRSGSAPLPAGVSFNFGQKVDAPALGSLASKPSVPSFSFSSSSNQSSPFGAAGPSAAL
SFGGTKTSDAPAADDKDEESEEPPKPEVKEVKEDDAFYSKKCKLFYKKELEFKEKGVGTL
HLKRTAEGKTQMIIRADTNLGNILLNILVPPTLPCSRVGKNNVMVVCVPNPPVDDKNPSV
AVPLLIRVKTAEDADELHKTLEEKKR
NT seq 1341 nt   +upstreamnt  +downstreamnt
atggcaaagaggatcgctgataaggagctgacagacaggaactgggacctggaggaggag
ggagaggaggccgggacgttttctgttgcgagtgaggatgtgttgaagagccgcgccata
aagaaagccaaacgcagaaacactggaggagagagcgaagggggaggagctttcaaaggg
tttaaaggcttctccatggcaacgtcctcaaccacgccctccagcagcctcacagcgttc
tccgggttcgggggtaccggcagctttaaaggcttcggaggcctgagcaacggaaccggc
tccacagcttcgtttggaggattcccgtctgctgcaaaggccggtgtggcgttcaatggg
ccctcctcagcccagcccgggactgacatcgtggcccagcagaccaatggctccgccccc
ggccctagccccgccccctgcagccgcagcagggagtacagccggcagctgacggcgctc
aaccagtcggtgcgcgactggatcagcaagcatgtgaacgacaacccgctgtgcgacctc
aaccccatcttcagagactacgagcgccacctggccagcatcgagcggcagtacggcgcc
agcgccgaggagacgcagcagggagacgcctccactccccctcctcctgctccctcttca
tcatcctcctcttcctcagtggctctgttctccttcagtaaaacctcgacagaagatttg
ggtcagaaacgctccggctcggcgccgctccctgccggcgtctcctttaacttcgggcag
aaggtggacgcacctgccctggggtccttggcatccaaaccgtccgtccccagcttttcc
ttctcctcctcatccaatcagagctccccgttcggagcagctggaccctcggctgcattg
tcctttggcgggaccaaaacttcagatgccccagctgcagacgacaaagacgaagaatcg
gaggagcctcccaaaccagaggtcaaggaggtcaaagaggacgacgccttctactctaag
aagtgtaagttattctacaagaaggagttggagttcaaagagaaaggcgtgggaacgctg
cacctcaaacgcaccgcagaggggaagacccagatgatcatcagagccgacaccaacctg
ggaaacattctgctgaacatccttgtgccgcccaccctgccgtgctcgcgggtcgggaag
aacaacgtcatggtggtctgtgtgccgaacccgcccgtcgacgacaagaacccgagcgtg
gccgtccccctgctgatccgagtgaagaccgcagaggacgccgacgagctccacaagacg
ctggaggagaagaaacgctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (38)   

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