KEGG   Xiphophorus maculatus (southern platyfish): 102228282
Entry
102228282         CDS       T02923                                 
Name
(RefSeq) collectin-12-like
  KO
K10062  collectin sub-family member 12
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma04145  Phagosome
Brite
KEGG Orthology (KO) [BR:xma00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    102228282
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xma04131]
    102228282
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:xma04091]
    102228282
Membrane trafficking [BR:xma04131]
 Endocytosis
  Phagocytosis
   Opsonins
    102228282
Lectins [BR:xma04091]
 C-Type lectins
  Group 2: Type II membrane receptors (Asialoglycprotien and DC receptors)
   Scavenger receptor with a CTLD (SRCL)
    102228282
SSDB
Motif
Pfam: Collagen Lectin_C Filament DUF948 BLOC1_2 ATG17_like TolA_bind_tri DUF4407
Other DBs
NCBI-GeneID: 102228282
NCBI-ProteinID: XP_023191947
Ensembl: ENSXMAG00000016656
Position
6:complement(18933555..18963898)
AA seq 761 aa
MKDEFTDEEEVQSFGYKRFGIQEGTECTKCKNDWALRAAIALLYVLCALLTIAVTVLGYK
VVQRMDNVTEGMQNYGGQINAVETDLKKLDDQAGEKSLNATSEINTFKSDLEVLQNQLKD
ISSRATSNRDMLEDLLVTGDNMQNGHVSLQSVLDGNADSLRGINQSLASYSGMIDDLQAD
TARLQSELQEQVKVQSETQVNVNSLNITQGQQRNLLGLLQKTVEDVSQAVQKLKNDYQIL
QQTANHTRSDSQWLKEKVHNLQVLATNNSALASSNGDTLDDLRTQLNALAIQIQNTSAIT
ESYDQGLREMMDRQRDNDNATSLKFDEMEVRLDKHENTMDRVTGNMSFATQILGVISSDL
SGLRSCAETVMRHTDLLADLNGTMEEAKTNSKDLRTQQDELAARLDQEVNNLSNVMEEMK
LIDSKHSQLITNFTILQGPPGPKGSRGDKGPQGPMGMTGQKGDKGDKGIPGLVGPKGDRG
PTGLAGATGPKGSTGARGLPGPKGSRGSGGRPGNPGEKGDPGANGYPGANGNPGLPGPQG
PQGLKGAAGPPGLEGPRGSVGPIGPAGPPGLPGLPGPVSSVNIKATRAPQVIKPPLPTLA
SVPTEKSKDSAQEQPPAAVSTPTPGCPPKFRKFGDSCYYFSSGSQRLNFNEANKFCKNIT
SHMLIINDNEEQQFIRNAISKDYFWLGLTDKEEENVWKWVDGTIPIFTNWKPGQPDNWTH
GHANGEDCAGLIRNANWNDFYCTDRIGFICERSSELVVPVL
NT seq 2286 nt   +upstreamnt  +downstreamnt
atgaaagacgaatttactgatgaagaggaggtgcagtccttcggctataaacggtttgga
attcaggagggtactgagtgcacaaagtgtaaaaatgactgggcactaagggcagccatc
gctctcctctatgtgctctgcgccctgctcactatagcagtgactgtccttgggtacaaa
gttgtccaaaggatggacaatgtcacagagggcatgcagaattatggaggccagatcaat
gctgtcgaaacagacttaaagaaactagatgatcaagcaggagagaagtccctcaatgcc
accagtgaaatcaataccttcaaatcagatctggaagtgttacaaaaccaactgaaagac
attagcagtagagcaacaagcaacagagacatgttagaagacctgctagtcacaggagac
aatatgcagaatggccatgtctcacttcaaagtgtcctggatggcaacgcagactcactg
cgtgggatcaatcaatccttggcttcctacagtggaatgattgacgacctccaggcagac
actgcacgactccagtctgagctccaggagcaggtcaaagtgcagagtgagactcaagtg
aatgtcaattcacttaatatcacccaaggacagcagcgcaacttgcttggcttgctacag
aagacagttgaagatgttagtcaggcagtacagaaactgaagaatgactatcagattctg
cagcaaacagccaatcatacgcgttcagactcacagtggctgaaagaaaaggtccataat
cttcaggttttggctacaaataattccgccctggccagctccaatggagacacactggat
gacttgagaacccagcttaatgctttggccatccaaatccagaatacctcagccatcaca
gagagttatgaccaaggcctgcgtgaaatgatggatcgccagagagacaatgataatgcc
acctcattaaagtttgatgagatggaagtacgattggacaagcatgagaacaccatggac
cgtgtgacaggaaacatgagctttgccacgcagatcttgggtgtcatcagttctgacctg
tccggcctgagatcctgtgctgagacagtgatgaggcatacggacctgctagcagacttg
aatggcaccatggaagaggccaagaccaacagcaaagatctgcgcacacagcaggatgag
cttgcagccaggttggaccaagaggtgaacaacctgtccaatgtgatggaggagatgaag
ctgatagacagcaaacattcacagcttattacaaactttaccattctgcagggtccgcca
ggtccaaaaggctccagaggtgataaaggtccgcaagggccgatgggaatgacaggacag
aagggagataaaggagacaaaggaattccaggcctggtgggaccaaaaggagaccgaggt
cctactggactagcaggtgcgactggtccaaaaggttccactggtgctcgggggcttcca
ggacctaaagggtctagaggctctggaggcagacctggaaatcctggtgagaaaggtgac
cctggagcaaatgggtaccctggagccaatggaaatcctggattgccagggccacaaggg
ccacagggacttaaaggagcagcaggacctccaggcttagaggggcctcgtgggtctgtt
ggcccaattggccctgctggtcctccaggccttccaggcttgcctggccctgtgtcttct
gtcaatataaaagcaaccagagcccctcaagtcatcaaacctcccctaccgactttagcc
tcagtaccaacagagaaatcaaaagactctgcacaggaacagcccccagctgctgtttcc
accccaacacctggttgtcctccaaagttcagaaagtttggggacagctgctactacttt
tcttctggttcccagagactcaactttaatgaagcaaacaagttctgtaaaaacataaca
tctcatatgctcataatcaatgacaatgaagaacagcaattcataagaaatgccatttca
aaggactatttctggttgggtcttactgacaaggaagaagaaaatgtctggaagtgggtg
gatggaaccataccgatttttacaaactggaaacctggtcagcccgataactggactcac
ggtcatgcaaatggagaggattgtgcgggtcttatccgtaatgctaactggaatgatttc
tactgcacagaccgcattgggttcatatgtgaacgttcatccgagttggtggttccagtt
ttatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (52)   

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