KEGG   Xiphophorus maculatus (southern platyfish): 102229535
Entry
102229535         CDS       T02923                                 
Symbol
rexo2
Name
(RefSeq) oligoribonuclease, mitochondrial isoform X1
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:xma00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    102229535 (rexo2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xma03019]
    102229535 (rexo2)
   03009 Ribosome biogenesis [BR:xma03009]
    102229535 (rexo2)
Messenger RNA biogenesis [BR:xma03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     102229535 (rexo2)
Ribosome biogenesis [BR:xma03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    102229535 (rexo2)
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-GeneID: 102229535
NCBI-ProteinID: XP_005811809
Position
11:32195624..32207012
AA seq 312 aa
MKNASAATLCRDRGWQQYSSGALSVCLNRKEEELSSMTTLSQNIAWTLARFKLGCGKKPF
LSSFFSRHCCSHRSKGSQQRAGAVLKAFVYPEALSRFSSLGCVSAVQLDRMCSKSMSHRM
VWVDLEMTGLDVEKDQIIEMACIITDSDLNIIAEGPSMIINQPDELLDGMSDWCKEHHGK
SGLIQAVQNSKMTLEQAEYEFLSFVRQHTPPGQCPLAGNSVHADKRFLDKYMPQFMYHLH
YRIIDVSTIKELCRRWFPEAFKMAPHKSATHRALDDIKESIKELQYYRASIFKAPSEEKK
HKIIGNSGNKRS
NT seq 939 nt   +upstreamnt  +downstreamnt
atgaagaatgcctctgctgccaccctctgtcgggacagagggtggcagcagtactccagc
ggtgcgctttccgtctgtcttaaccggaaagaagaagaactttctagcatgaccactctg
tcacagaacatcgcgtggactttagctaggttcaaactgggatgcgggaagaaaccgttt
ttgtcttcgttcttttccagacactgttgttcacaccgcagtaaaggatcgcagcagcgc
gctggagctgtcctaaaggcctttgtttatccagaagctctcagccggttttcatcactt
ggctgcgtttcagctgttcagttggacaggatgtgttccaagtcaatgtcgcacaggatg
gtgtgggtggacctggagatgacaggtttagatgttgagaaggaccaaatcattgaaatg
gcctgcatcatcacagactctgatctgaacattatagcagagggaccatccatgatcatc
aaccaaccagacgagcttctggatggaatgtcagactggtgtaaagagcatcatggaaag
tcagggctgatccaggctgtccaaaacagtaaaatgaccctggaacaagcagagtatgaa
tttctgtcctttgtcaggcagcacactccacctggacaatgcccccttgccggcaactct
gtgcatgcagacaaaaggttcctggacaagtacatgccacaattcatgtaccatcttcac
tacagaatcattgatgtcagcaccatcaaagagctctgcagacggtggttcccagaagca
tttaagatggcacctcataagagcgcaacccacagagccttagatgacataaaggagagt
attaaggagctgcagtactacagagccagcattttcaaagcaccatcagaggaaaagaaa
cacaagattataggaaatagtggcaataaaaggagttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (45)   

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