KEGG   Xiphophorus maculatus (southern platyfish): 102229886
Entry
102229886         CDS       T02923                                 
Symbol
ctdp1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase
  KO
K15732  RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16]
Organism
xma  Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:xma00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:xma01009]
    102229886 (ctdp1)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xma03021]
    102229886 (ctdp1)
Enzymes [BR:xma01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     102229886 (ctdp1)
Protein phosphatases and associated proteins [BR:xma01009]
 HAD phosphatases
  Fcp/Scp phosphatases
   102229886 (ctdp1)
Transcription machinery [BR:xma03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     102229886 (ctdp1)
SSDB
Motif
Pfam: FCP1_C NIF BRCT PTCB-BRCT Biotin_lipoyl RTT107_BRCT_5 Nairovirus_Gn LIG3_BRCT
Other DBs
NCBI-GeneID: 102229886
NCBI-ProteinID: XP_014328126
Ensembl: ENSXMAG00000005765
Position
13:15588638..15667295
AA seq 1000 aa
MEDPPADPSGGGGGGAAEGPTVQVADMRWPSGALPLRLLEWKVKPGSLVNVDSVLALCAL
IAQDKETEGAARLPEKKVKSDRAGVVKELCCQPGQIIPPGGVIVRIEECSHPIVMKGLCA
ECGQDLTQLQGTNGNQQSPISTATVSMVHSVPELMVSSEQAKQLAREDQQRLHRNKKLVL
MVDLDQTLIHTTEQHCQRMSNKGIFHFQLGRGEPMLHTRLRPHCKEFLEKIAKLYELHVF
TFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDRE
DVWKFAPNLITVKKYIYFQGIGDINAPPGSREAQMAKKAGGPSSRPTESTEQAEAIGADE
QNNGLRKRSKEPGISGKEELSLPQSSQEGASGERTQGGVEEKQEEAGRSRGSDAGQKVTD
SGQKPKDTQVEDNKDVKEDGGNRTEEAQGGANSSAPSHDFNNLDFDLSSDSDSESGTGKP
ASPDGGSQSRTRATKESEQEGDGHEPFDEDVTKDGDSKGSCEVENSSDSAEHPGVDLPDH
ELGNGCLERREPETESQNSEQSGVTVGEELLDQSMEDEEEETDNDQDDHLIYLEEVLERI
HAEYFARYETYLRKEALEMPDIRRIVPELKSKTLEGTTVVFSGLYPTNYPMERTREFYHA
KALGAKIGKSLILNSQDPNRTTHLVAARAGTEKVRQAQGCKHLHVVNPDWLWSCLERWER
VEEQLYPLKEDYSRTPRSNSPATFLDNQGCLQKAVFQPAPVHPRPRGAFSEARTYDSVTG
KLIRRGPQAGRPSAYLQVSGPLSDRMDQSGLRGAAQGQQDEAAGSSQDDEQPGPSRRERQ
PSMSETMPLYTLCKEDLDSMDKEVDDILGEESDNESEGRGKEKPGNEDIAEEEEEEQQQQ
QPEAGELTTSGPPSKPDGVEERLQTTPPCDSSLSENVPRGQKRKYDDAGEDEEDADVESK
QEGRDSADESFKDSNEEEEGSSSEADEMAAALEAELNDFM
NT seq 3003 nt   +upstreamnt  +downstreamnt
atggaggatcctccagcagatcctagcggcggcggcggcggtggtgcagcggagggcccc
acggtgcaggtggctgacatgcgctggccaagcggagctcttccgctccggctcctggag
tggaaggtcaagccagggtctctcgtgaacgtggactcggttcttgccttatgtgctctc
atagctcaggataaggagacggagggtgctgctaggctgccagagaagaaggtgaaatcg
gaccgtgctggagtggtgaaggagctctgctgtcagccaggacaaataattcctcccggg
ggcgtcatcgtcagaatcgaagaatgcagccatccaatagtgatgaagggtctgtgcgcc
gaatgcggccaggatctgactcagctgcagggaactaatgggaaccagcaaagtcccatc
tccacagcaacagtctccatggtgcacagtgtccctgaactgatggtcagctcggagcaa
gctaaacagttggcccgagaagaccagcagagactgcaccgtaacaaaaagctggtcctc
atggtggacctggaccagacgctgatccacaccactgagcagcactgccagcgcatgtcc
aacaaggggatcttccacttccagctcggtcggggggagcccatgctccacacgcggtta
cggccgcactgcaaggaattcctggagaaaatcgccaaactctacgagctgcacgtcttc
acattcgggagccgtttatatgcacacaccatcgctggcttcttggatcccgaaaagaaa
cttttctctcacagaatcctttctagagacgaatgcatagatccgttttccaagacgggg
aatcttaggaacctgttcccctgcggcgactccatggtctgcatcatcgacgaccgggaa
gacgtctggaagtttgcaccgaacctcatcactgtgaagaagtacatctacttccagggc
atcggagacatcaacgctccgccgggatcacgggaagctcagatggccaagaaagctgga
ggtccttcgagtcggccgacagagagcacagaacaagcggaggcgattggtgctgatgag
caaaataatggcctcaggaaacggtcaaaggagccaggcatttcaggaaaggaagagctt
tcattacctcagtcttctcaggaaggagcttccggtgaaaggacacaggggggtgtggag
gagaagcaggaggaggcaggacggagtcgagggtcagacgctggtcaaaaggttacagac
tctgggcagaaaccaaaggacactcaggtggaggataacaaagatgttaaagaggatggt
ggtaacaggacagaagaggcacagggaggtgccaattcctcagcaccgagccatgacttc
aataacttggattttgacctttctagtgacagcgacagtgaatcgggtacagggaagccc
gcctcaccagacggcgggagtcaaagtaggactcgcgcaacaaaggagtctgaacaggaa
ggagatggacacgagccctttgatgaggacgtgacgaaggacggggacagcaaaggttct
tgcgaagtcgagaacagctcggactcggcagaacaccctggcgtcgacctgcccgaccac
gagctgggtaacggctgcttagagaggagagaaccggaaaccgagtcccagaacagcgaa
cagtccggagtcactgtgggagaggagctgctggatcagagcatggaagacgaagaggaa
gagaccgacaatgaccaggacgatcatctcatctacctggaggaggtgctggaacggatc
cacgcagagtacttcgcccgttacgagacctacctgaggaaggaggcgttggagatgccg
gacatccgcaggatcgttccagagctgaagagcaagactctggagggcacgacggttgtg
ttcagcgggctctaccccactaactaccccatggagaggacaagggagttctaccacgcc
aaagccctgggggccaaaatcggcaagagtctgatcctcaactctcaggaccccaaccgg
acgacacatctagttgcagcgagggcaggaactgagaaggtacggcaggcgcagggctgc
aagcacctccatgtggtcaaccccgactggctgtggagctgcctggagcgctgggagcgg
gtggaggagcagttgtaccctctgaaggaggattactccaggacgccacggagcaacagc
ccggccacttttctcgacaatcagggctgcctgcagaaggccgtcttccaaccagctccc
gtccaccccagaccccgaggggcattttcagaggcccggacctatgactcggtcacaggg
aagctaatccgcaggggccctcaggcggggcgtccatcagcctacctccaggtgtcggga
cccctctccgaccgcatggatcagtctggtctcaggggagctgcacagggtcagcaagat
gaggcggccgggtccagccaggacgacgagcagccggggccttcccgccgggagcggcag
ccgagcatgtcggaaacgatgccgctgtacacgctctgcaaggaggacctggacagcatg
gacaaagaggtggacgatattttaggagaggagagcgacaacgagagcgagggtcgaggg
aaggagaagccgggcaacgaggatattgctgaggaagaggaggaggagcaacagcagcag
cagccagaagctggagagttgacaacatcagggcccccctctaagccagacggagtggag
gaaagacttcagaccacacctccctgtgactccagtttgtcagagaatgtcccaaggggt
caaaaacggaagtacgatgacgccggagaggatgaggaggacgctgatgtggagagcaag
caggaagggcgggactccgccgacgagtcgtttaaagactccaacgaggaagaggagggc
agcagctcggaggcagacgagatggccgccgccctggaggcggagctaaacgactttatg
tga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (37)   

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