KEGG   Xiphophorus maculatus (southern platyfish): 102232653
Entry
102232653         CDS       T02923                                 
Name
(RefSeq) protein zyg-11 homolog isoform X1
  KO
K10350  Zyg-11 protein
Organism
xma  Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:xma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xma04121]
    102232653
Ubiquitin system [BR:xma04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul2 complex
    Target recognizing subunit
     102232653
SSDB
Motif
Pfam: LRR_4 LRR_8
Other DBs
NCBI-GeneID: 102232653
NCBI-ProteinID: XP_014328781
Ensembl: ENSXMAG00000018334
Position
6:complement(5115214..5132336)
AA seq 760 aa
MHHLITFRCVLQDGEGPQTLCDLCLAQVCSRLDALCRKGADGSMSLIWAPLFPQELADQL
LQMMATKGMLNDVTVGIFRNSEKLRLRSASIRYCKVSAKAFRLALCPHRLLELDASWVPG
GLTGADVILGLASNPDCRASLQMLALNGLSLNLGSPEKDGGVCVGFSSLEGLKTLHLVNT
DLTDDILEDICSLPRLETLDISCSSVSELNALLKCKNTLRSLIAHRLYRLDTSPVRLLFI
FAQLHALRHLDFSNNHFANDDSESRVDGDETVRQLLEAGPQILPSLLSLDISGRKTINDS
ALRGFVESRSGLVFLGLLATGLSSSPVLSSHENLKVTGEANEKQLWEALRRYRERECFVK
EALIHLYHLTTDTDKPQPDMLKLVVEAMQSHPESPHVHLLATACVFNLTTRDLAEVMPVR
LMSATVTQLLHAMETFPNIQQVQSNCLMALCNDYLLQNVPFDRYLAAMLVIKWLSNHEEP
TLQRIAVAVISVLVAKISIEETALLSNDMSFMKQLLTVVQQKAMLGVVDPTLKFALSALW
NLTDETPTAARNFIECQGLELYKEVLESYYSETTIQQKVLGLLNNIAEVEELQSDLMDED
LLEHILSLLQDSQMVVGVRYFAGGILAQLASRAEAWTLDHALRRTVLEQLHESITTWPHL
EQEMVSYRSFRPFCSLLQTCQPSGVQLWAVWAIHLVCRQNASYYIHMLTKEGLTELLKAL
DTHPDTHSDVKRVSQSIVLMVQEQQTPCEVANSQTEPGKS
NT seq 2283 nt   +upstreamnt  +downstreamnt
atgcatcatctgattacttttcgatgtgtgctgcaggatggcgagggcccccagacgctg
tgtgacctctgcttggctcaggtgtgcagcagattagatgctttgtgcaggaagggagca
gacggttcaatgagcctcatctgggccccactgtttccacaggaactggctgaccaactg
ctgcaaatgatggcaaccaaaggaatgctgaatgacgtaactgttgggattttccgaaac
agcgagaagctccgcctgcgcagcgcctccatccgctactgtaaggtgtccgctaaggct
ttccgcctggccctctgccctcacaggctcctggagctagacgcctcctgggtccccggg
ggtctaacgggggctgatgtcatcttgggcctggcctccaacccagactgcagggctagt
ctgcagatgttggccctcaatggcttgagtctgaacctgggatctccggaaaaggacggt
ggagtgtgcgttggctttagctccctggagggcctcaagacgctccacctcgtcaacaca
gatctaacggatgatatccttgaggatatttgttctctcccccggctggagactttggat
atctcctgtagctctgtgtctgaattgaatgcgctccttaaatgtaaaaacacactgaga
tccctcattgcccaccggctgtaccgacttgacacgtctcctgtcaggttgctttttatc
ttcgcccaacttcatgctcttaggcatctggacttctcgaacaaccactttgccaatgac
gacagcgaaagtagggtcgacggagacgagacagtgaggcagcttctggaagcgggtcct
cagattctcccgtcgcttctctctttagatatttcaggaaggaaaacgatcaatgactcg
gcgctcagaggctttgtggagtccaggagcggcctcgtctttctcggtctgcttgccact
ggacttagttcctctcctgttctatcttcacacgaaaacctaaaagtaactggagaagct
aatgagaagcagctctgggaggcactccgaaggtacagagagagggagtgtttcgtaaaa
gaggccctcatccatctctaccatctgactaccgacactgacaaaccgcagccagacatg
ctgaagttggtggtggaggccatgcagagccacccagagtccccgcatgtccacctgttg
gccacggcgtgtgtgttcaacctgaccacccgggacctggcagaggttatgcctgtcagg
ctgatgagcgccacggtaacccagctgctgcacgccatggagaccttccctaacatccag
caggtgcagagcaactgtctgatggcgctctgcaacgattacctgctgcagaatgttcct
tttgacaggtatttagcggccatgttggtgatcaaatggctgagcaaccacgaggagccg
accctgcagaggattgcggtggccgtcatttctgtccttgtggcgaagatttccatagag
gagacagcactgctcagcaacgacatgtcatttatgaagcagctgctgactgtcgtgcag
cagaaagccatgctgggcgtggtagaccccactctgaagtttgccctgagcgcgctgtgg
aacctgaccgacgagacgcccacggccgcccgcaacttcatcgagtgtcagggcctggag
ctctacaaggaggttctggagtcctactacagcgaaactactattcaacagaaagttctt
ggccttttgaacaacatagcagaggtggaggagctccagtctgacctgatggatgaagac
ctgttggagcacatcctcagcctcctgcaggactcccagatggtggtgggggtgcgctac
tttgcaggagggattctggcgcagctggcctccagagcagaggcctggacgctggaccac
gcgctccggcgcaccgttctggagcagctgcatgaatcaataacaacatggcctcatctg
gagcaggagatggtgtcttacaggtccttccgtccattttgctctctgcttcagacttgc
cagccctcaggggtccagctgtgggcggtgtgggcgatacatctcgtttgcagacaaaac
gcttcgtattacatccacatgctaactaaggagggcctgacggagcttctgaaagcactg
gacacacatcccgacacacacagcgacgttaaaagggtttcccaaagcatcgtgctgatg
gtacaggaacagcagactccctgtgaggtggcgaacagccagacggagcctgggaagtcc
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

Download RDF
DBGET integrated database retrieval system