KEGG   Xiphophorus maculatus (southern platyfish): 102233937
Entry
102233937         CDS       T02923                                 
Symbol
srp54
Name
(RefSeq) signal recognition particle 54 kDa protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma03060  Protein export
Brite
KEGG Orthology (KO) [BR:xma00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    102233937 (srp54)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:xma02044]
    102233937 (srp54)
Enzymes [BR:xma01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     102233937 (srp54)
Secretion system [BR:xma02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   102233937 (srp54)
  Eukaryotic Sec-SRP protein
   102233937 (srp54)
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N cobW CbiA nSTAND3 DUF2209 AAA_33 AAA_17 ResIII SRPRB MeaB AAA_22 AAA_30 APS_kinase MobB AAA_19 MMR_HSR1 AAA_16 AAA 6PF2K PduV-EutP ATP_bind_1 Zeta_toxin Thymidylate_kin AAA_18 Torsin AAA_31
Other DBs
NCBI-GeneID: 102233937
NCBI-ProteinID: XP_023208889
Ensembl: ENSXMAG00000018315
Position
19:20353840..20373199
AA seq 504 aa
MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKSAI
DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK
LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIAAEGVEKFK
GENFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACEAQAKAFKDKV
DVASVIVTKLDGHAKGGGALSAVAATRSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI
EGLIDRVNELKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGFGTDFM
SKGNEQESMARLKKLMTIMDSMNDQELDSKDGAKLFSKQPNRIQRVARGSGVATRDVQEL
LTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDPRVLHHMGGMAGL
QSMMRQFQQGAAGNMKGMMGFNNM
NT seq 1515 nt   +upstreamnt  +downstreamnt
atggtgctggccgacctgggaaggaagatcacctcggcgctgaggtcactcagcaacgcc
accatcatcaatgaagaggtgttgaacgccatgttgaaggaggtgtgtgctgctctcctg
gaggcagacgttaacatcaaactggtcaaacaactgagggaaaacgtcaagtccgccata
gacctggaggagatggcctcaggcctgaacaagaggaggatgatccaacacgctgtgttc
aaggagctggtgaagctggtcgatcccggcgtgaaggcctggactccgactaaaggcaag
aacaacgtcatcatgtttgttggtctgcaaggcagtggcaaaactacaacctgctccaag
ctcgcttattattaccagagaaaaggctggaagacctgcctgatctgcgccgacaccttc
agagcaggtgccttcgatcagctcaaacaaaacgccaccaaagccagaatacctttttat
ggcagttacactgagatggatcctgtggtgatcgccgcagaaggcgtcgagaaattcaaa
ggcgaaaactttgagatcatcatcgtggacacaagtggaagacacaaacaggaggattca
ctgtttgaggagatgctgcaagtctccaacgcagtgcaacctgataacattgtgtacgtg
atggatgcttccatcggtcaggcctgcgaagcccaggctaaagctttcaaagacaaagtg
gacgtagcgtcggtcatcgtcacaaagctagatggacacgccaaaggaggcggagctttg
agcgctgtggcggccaccaggagtcccatcatcttcatcggaacaggggaacacatcgac
gacttcgagccgtttaagactcagcctttcatcagcaaactgctgggaatgggtgatatt
gaaggactgatcgacagagtgaacgagctaaagctggatgacaacgaggagctgatagac
aaactgaaacatggtcagttcacgctcagggacatgtacgagcagttccagaacatcatg
aagatggggcccttcggacaaattatgggtatgattcccggttttggtacagatttcatg
agtaaaggaaacgaacaggaatcaatggccagattgaagaaactcatgaccatcatggac
agcatgaatgaccaggaactggacagtaaagatggggcgaagctgttcagtaagcagccc
aaccggatccagagagtggcccgtggatctggagttgccaccagagacgttcaggagtta
ctcactcagtacactaagtttgctcagatggtgaagaagatgggaggcatcaaaggacta
ttcaaaggaggagacatgtccaaaaacgtgaacccatctcagatggccaaactgaaccag
cagatggccaaaatgatggaccctcgggtcctgcatcatatggggggcatggctggcctt
cagtccatgatgcgccagttccagcaaggagcagccggcaacatgaaaggcatgatggga
tttaacaacatgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (28)   
   Pfam (28)   
All databases (69)   

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