KEGG   Xiphophorus maculatus (southern platyfish): 102234612
Entry
102234612         CDS       T02923                                 
Name
(RefSeq) LOW QUALITY PROTEIN: SH3 domain-containing RING finger protein 3-like
  KO
K12171  E3 ubiquitin-protein ligase SH3RF [EC:2.3.2.27]
Organism
xma  Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:xma00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:xma01009]
    102234612
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xma04121]
    102234612
Enzymes [BR:xma01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102234612
Protein phosphatases and associated proteins [BR:xma01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102234612
Ubiquitin system [BR:xma04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    102234612
SSDB
Motif
Pfam: SH3_9 SH3_1 SH3_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_2 zf-C3HC4_3 zf-RING_5 zf-RING_4 zf-C3HC4_4 zf-RING_11 Prok-RING_4 zf-rbx1
Other DBs
NCBI-GeneID: 102234612
NCBI-ProteinID: XP_023192666
Position
7:complement(20957306..21072964)
AA seq 973 aa
MGCAAARRMHASDGFRAFCLGCMSVHAAIVDGRAENDDESVTSPLSAQLLERRGGGGSEK
QKHAERNRRRPRTAESTQNTPGAAYWQKXGAGQHRSASVGTFHTTRVHLPECSVFPRKSP
CGVSTHTEAQMLTLSADMDDSSSLLDLLECSVCLERLDTTAKVLPCQHTFCRRCLENIVS
SRNELRCPECRILVDCGVDDLPANILLVRLLDGIKQRPQRGSAGGGGGGRQSLAGGSLQG
YAAGISASPPGTAIRELPVATRSSPVKNIPALPCGKALYSYEGKEPGDLQFSKGDIIILR
RKVDDNWYHGELNGCHGFLPASYIQLLRPLSQTPPQGKALYDFEVKDKDQDKDCLAFSKD
EVLTVIRRVDENWAEGMLGDKIGIFPILYVELNETAKQLMEIDKPMPANAPGPSSEPAPL
GPCTPGPSPTASPSNGNGSGHRRGEGKKNAKKRHSFSALSVSQRAAQLNNRHSMEISHPV
LISSSDPRAAARIQDASPPGPSPSSMGIPLPPKVASLTSELLAHAKVQLPLNIYLALYAY
KPQKADELELRKGEMYRVTEKCQDGWFKGTSLRTAASGVFPGNYVTPVSRAPFGLVSPRG
SSLSSPVGGGGNGYSQAAGKISDPSSPGSPGPSSSRPATPLVTSANCVNSVSPASSPQTA
AAQLKNCLRSSQHVANQARTSMQLVHSPPAGSPERPTVSISPLRPQNSSPSRCAGQSGRP
LSMVSPGPSLGPSPLSSPASRPILPLSSPLSCLTPPNVSAVFLNGEPASPLQPPSPGPSH
ALTQGALAPKVEKKERKAAGLLKLLSGAAAKKKPRSPPSSPPTHDPSQAGQGAGATEPTH
HPHHLHHHGRSGSCPMASQGRAGSCPIESDMPGAIGLEPLHRKSGSLDTNFPMSPPATRA
GSALMVLRPEPKPLSRERYRVVVPYPPQSEAEIELREGDVVFVHKKREDGWYKGTLQRTG
QTGLFPGSFVESF
NT seq 2922 nt   +upstreamnt  +downstreamnt
atgggctgtgcagctgcccgccgcatgcatgcgagtgatggttttagggctttctgcctc
gggtgcatgagcgtgcacgccgcaattgttgatgggcgcgcggaaaatgatgatgagagc
gtgacctcaccgctttctgcacagctgctggagagaagaggaggaggaggcagtgagaaa
cagaaacacgctgagagaaacagacggagacccagaacagcggagagcactcaaaacaca
ccaggagctgcgtattggcaaaaanggggggctggacaacatcgaagtgcgtccgtgggc
accttccacaccacccgggttcacctcccagaatgttctgttttccccagaaaaagtccc
tgcggtgtatccacgcacactgaagcccagatgctcaccctctccgccgacatggacgac
tcttcgtcgctactggatctgctggagtgctcggtgtgcctggagcgcctggacaccacg
gccaaggtgctgccgtgccagcacaccttctgccgccgttgcctggagaacatcgtcagc
tccaggaacgaactccgctgcccggagtgccgcatcctggtggactgcggggtggacgac
ctgccggccaacatccttctggttcgcctcctggacgggatcaagcagcggccgcagcga
gggagcgcaggaggaggaggaggtggccggcagtctctagccggaggttcgctgcagggg
tacgctgccgggatatccgcctcccctccgggaactgcaattagagagctgcccgtggcc
accaggagctcccctgtcaagaatatcccagcactgccttgcggtaaagcactctattca
tatgaaggcaaggaaccaggcgacttacagttttccaagggtgatattatcatcctgcgg
cgcaaggtggatgacaactggtaccacggggagcttaatggttgccatggcttcttgcca
gctagctacatccaactgctgcgtcccctgagtcaaactccacctcagggcaaagctttg
tacgactttgaggtcaaagacaaagaccaggataaagactgcctggcctttagcaaggac
gaggttctgacagtaatcagacgcgtagatgagaactgggcagaaggcatgctgggagac
aagattggcatcttccccattctttatgttgagttaaatgaaacagcgaagcagctgatg
gagattgacaaacctatgccagcgaatgcaccaggtcccagctctgagccagcccccctg
ggtccctgcactcccggtccctcccccactgcctcgccgtctaatggaaatggctctggc
cacaggagaggtgaagggaagaaaaacgcaaagaagcggcattctttctccgcactctct
gtcagccagagggctgcccagctcaacaacagacacagcatggagatctcgcacccggtc
ctcatcagctcctctgaccccagagcagctgctcgcattcaggatgcatctcctccaggt
ccctctccatcctcaatggggataccgcttccccccaaagtggcgtctcttacctctgag
ctgttggcccatgccaaggtgcagctgccactcaacatatatttagctctatacgcctac
aagccccagaaagctgacgagctggagctaaggaagggggagatgtaccgggtgacagag
aagtgtcaggatggatggttcaaaggcacctcactaagaactgccgcctctggagtcttt
ccaggaaactacgtcactcccgtgtccagggctccatttggacttgtatctcctcgaggt
tcgagtttgtccagtccagttggaggagggggaaatgggtacagtcaagcggcaggtaaa
atctcagacccttcatcccccggatctccaggcccctcgtcgtctcgtcccgccactccg
cttgtgacctcagcaaactgcgtcaacagtgtcagccccgcgtcctcgccgcaaactgcc
gccgcccagctgaagaactgcctgcgttccagccagcatgtggccaatcaggcccgcact
tcaatgcagctggtccatagtccacctgctggaagtccagagcgccccactgtgtccatc
tccccgttgcgtcctcagaactcctctccctcacgctgcgctggccagtcgggtcgtccc
ctctccatggtgtctccaggacccagcttaggcccctccccgctctcctccccagcttca
cggcccatcctccctctctcctcccctctctcctgtctcacacctcccaacgtctctgcc
gtgtttctcaacggtgagccggccagtccgctgcagccgccttctcctggtccctcccac
gctctcacccagggtgccctagcacccaaagtggagaagaaggagagaaaagcagcaggt
ttgctaaagcttttgtcaggggctgctgccaaaaagaaaccacgctcacccccgtcctct
ccacccacacacgacccctcgcaggcaggccagggggccggggccacagaaccaacccac
caccctcaccaccttcaccatcacggtcgctcgggctcctgtccgatggcgtcacagggc
cgagccggctcgtgcccaatcgagagtgatatgccaggggcaatagggttggagccgcta
cacaggaagtccggttccctggataccaacttccccatgtcacctccagcaacacgtgct
ggcagcgctctaatggtcctccggcctgagcccaaacctttgtcaagagagaggtatcgt
gtggtcgttccttacccgcctcagagtgaagcggagattgaactgcgggaaggggacgtg
gtgtttgttcataagaagagggaagacgggtggtacaaaggcaccttgcagaggacggga
cagaccggcttgtttcccggcagcttcgtcgagagcttctaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG ORTHOLOGY (1)   
   RefGene (38)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (64)   

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