KEGG   Xiphophorus maculatus (southern platyfish): 102236923
Entry
102236923         CDS       T02923                                 
Name
(RefSeq) antigen peptide transporter 2-like isoform X2
  KO
K05654  ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:7.4.2.14]
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma02010  ABC transporters
xma04145  Phagosome
xma05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:xma00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    102236923
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    102236923
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    102236923
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:xma02000]
    102236923
Enzymes [BR:xma01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.14  ABC-type antigen peptide transporter
     102236923
Transporters [BR:xma02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB2, 3, 8, 9, 10 subgroups
    102236923
SSDB
Motif
Pfam: ABC_membrane ABC_tran AAA_21 SMC_N AAA_22 AAA_PrkA Rad17 RsgA_GTPase AAA_29 Lectin_N
Other DBs
NCBI-GeneID: 102236923
NCBI-ProteinID: XP_005805480
Ensembl: ENSXMAG00000014741
Position
10:complement(15942176..15950770)
AA seq 714 aa
MAVIIWALCIILLDALLCSAQWAWLVLWKCSSCGGLAGVWAFGLIKWLFLHVFISALTDG
KQRAILHRLAALLCLISPVFETGRILTAPPSERPTEPSPDLSMLLLGAASSSLACLVWER
WISPDGQKTKDNLDTKRLLMRVLTYFKPDTVYLVAAFGFLIMGVICDTYIPLYQGKVIDM
LSGQQLQSGFGYAIGHLVLISSGSALFSGMRGGIFMATLARLNKRLKHLLFHNLLKQEVH
FFEENNPGRLSSRLHSDVDRMGRTVALNANATVRSTVKTFLMLRVMLGLSWELTVLTCIE
MPLLATLQNKYIKLSKDLKDRTQECLAQNKDLASQTISGIRTVRSFNAEKEELRRYHVAL
EELCAIKRQSDIYSAVYLLTRRLVSLGIKIFMLIQARSLISAGQLSIGSLVSFFLYQKPM
SVNLREIMYCYGETMSTVGVISKVLSYLDRTPKSKKEGDLAPKTLDGRIAFQNISFSYPS
APSGKPALKSVSLEIRPGKITALVGPSGGGKSSCVSLLKRLYEPQEGQILLDGEPLHRYQ
KKYFHQKVALVSQNPVLFSGSLKYNIEYGLEERPLEKMEEVAKRINIHKFISEMENGYDS
DIGECGGKLSEGQKQSLAIIRALVRDPQVVILDEATSKLDVNAEKAVLNEVLARGRTVLI
VAHQLNIVERADHIIFMEDGSIREEGTHEELMNKKGCYFRLKEELFSEAAEENL
NT seq 2145 nt   +upstreamnt  +downstreamnt
atggcggtgataatatgggcgttgtgcatcattctcctcgatgcattgctgtgttcagca
cagtgggcttggttggtgctgtggaagtgctccagctgtggcggactggcaggagtgtgg
gcctttggactgataaagtggcttttcctccatgtttttatctcagctctaacagatggg
aaacagcgggcaatactacataggttagcagcgctcctctgccttatttctcctgtgttc
gaaactggacggatcctcaccgcacctccctcggagcggcccacagaaccttctcctgat
ctcagcatgctgttgttgggtgctgcgtcctcatcgttggcctgtttggtgtgggaaaga
tggatttctccagatggacagaagacaaaagacaatctggacactaaacgtttgctcatg
agagtgctgacgtacttcaaaccagacactgtttatctggtcgcagcttttggcttcctc
atcatgggagtcatctgtgatacttacatccctttatatcagggaaaagtgattgacatg
ctcagcggtcaacagcttcaaagtggttttggttatgcaatcgggcatctagtacttatt
tcttctggaagtgcgctgttctctgggatgagaggaggcatttttatggctacgttggcc
agactgaacaagaggctgaaacatctgctgtttcacaacctcctgaagcaagaggtgcac
ttctttgaggagaacaaccctggacgactgtcctctcggctgcacagtgacgttgacagg
atgggacgaaccgtggcgctgaacgccaacgcaacagttcgcagcacagtcaaaactttc
ctcatgcttagagtgatgttgggcctgtcctgggagctgaccgtgctcacttgcatagag
atgccgctcctggccacgttgcaaaataaatacatcaagctgtccaaggacctgaaagat
cggacccaggaatgcctcgctcagaacaaagatctggcttcccagacgatcagcgggatc
cgaacggtccgcagcttcaacgcagagaaagaggagctgaggcgatatcatgtggctcta
gaagagctgtgtgccatcaaaagacagtcagatatatacagcgccgtttatctcctaaca
cgaaggctggtgtctctgggtataaagatatttatgctgattcaagcccgaagcctcatt
tctgccggtcagctcagcatcggtagtctggtgtcctttttcttgtaccagaagccgatg
tcagtcaatctacgggagatcatgtattgctacggagagactatgtccacggtgggagtc
atttccaaagtgctgagttacctggacaggacaccaaaaagcaaaaaggaaggagacttg
gctcctaagacgctggatgggagaatagctttccaaaatatcagtttcagttatccttct
gctccttcgggtaaaccagctctaaagtcggtgtcgttggaaatccgcccagggaagatc
acggctctggtgggtccctccggtggcggaaagagttcctgcgtcagcctcctgaagagg
ctgtatgagcctcaggagggtcagatcctgctggacggggagccgctgcaccgctaccag
aaaaaatacttccatcagaaggtcgcactggtttcccagaatcctgtgctgttttctggt
tctctgaagtacaacatagagtatggtctagaggaacgtcctctggagaagatggaagaa
gttgcaaagaggatcaacatacacaagttcatctctgaaatggagaatggctatgactct
gatattggagagtgtggaggcaaactgtcagaaggacagaagcagagcctcgccatcatc
agagctctggttcgagatccccaggtcgtcatcctggacgaggccacaagcaaactggat
gtaaatgcagagaaggcggttctgaacgaggttctggctcgcggacggacggttctgatc
gtggctcatcagctcaacattgtggagagagcggatcacatcattttcatggaggacggg
tcgatccgggaggaggggacccatgaggaactcatgaacaaaaaaggatgctacttccgt
ctgaaggaggagctgttttctgaagctgctgaagaaaacttgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (10)   
   Pfam (10)   
All databases (43)   

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