KEGG   Xiphophorus maculatus (southern platyfish): 102236931
Entry
102236931         CDS       T02923                                 
Name
(RefSeq) ras-related protein Rab-1A
  KO
K07875  Ras-related protein Rab-1B
Organism
xma  Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:xma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xma04131]
    102236931
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xma04147]
    102236931
   04031 GTP-binding proteins [BR:xma04031]
    102236931
Membrane trafficking [BR:xma04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    102236931
 Autophagy
  Other autophagy associated proteins
    102236931
Exosome [BR:xma04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102236931
  Exosomal proteins of other body fluids (saliva and urine)
   102236931
  Exosomal proteins of colorectal cancer cells
   102236931
  Exosomal proteins of bladder cancer cells
   102236931
GTP-binding proteins [BR:xma04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    102236931
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RsgA_GTPase Gtr1_RagA SRPRB AAA_7 FeoB_N AAA_22 ABC_tran AAA_16 AAA_29 CRAL_TRIO_2 AAA_5 LANC_like TniB
Other DBs
NCBI-GeneID: 102236931
NCBI-ProteinID: XP_005807971
Ensembl: ENSXMAG00000008122
UniProt: A0A3B5R3M3
Position
14:complement(3724706..3733581)
AA seq 201 aa
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNIKQWLQEIDRYASENVNKLLVG
NKCDLTTKKVVDYTTAKEFADSLAIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATAS
GDKPNLKIESTPVRQSGGGCC
NT seq 606 nt   +upstreamnt  +downstreamnt
atgaatcccgagtatgattatctgttcaagctgctcctcatcggagactctggagtggga
aagtcctgtcttcttctgcgcttcgctgatgacacctacacagagagctacatcagcacc
atcggagtggactttaagatccgcaccatcgagctagacagcaagactattaaactgcag
atttgggacactgcaggtcaggagaggtttcgaaccatcacctctagttattaccgtgga
gcccatggcatcatcgtggtgtatgacgtgaccgaccaggagtcttataacaacatcaag
cagtggctgcaggaaatcgaccgctatgccagtgaaaatgtgaacaagcttctggtgggc
aacaagtgtgacctcactactaagaaagtggtggactatacaacagccaaggagtttgcc
gactctctggctatccccttcctggagacgagtgctaagaacgccaccaatgtagagcag
gctttcatgaccatggcggctgagatcaagaagcgcatggggccaggggccacagccagc
ggtgacaaacccaacctaaagattgagagcaccccagtgaggcagtctggaggtggctgc
tgttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (18)   
   Pfam (18)   
All databases (43)   

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