KEGG T00360: XOO

Xanthomonas oryzae pv. oryzae MAFF311018: XOO_0324

Entry

XOO_0324 CDS T00360

Gene name

ddl

Definition

D-alanyl-alanine synthetase A (EC:6.3.2.4)

Orthology

K01921

D-alanine-D-alanine ligase [EC:6.3.2.4]

Organism

xom Xanthomonas oryzae pv. oryzae MAFF311018

Pathway

xom00473	D-Alanine metabolism
xom00550	Peptidoglycan biosynthesis
xom01100	Metabolic pathways

Class

Metabolism; Metabolism of other amino acids; D-Alanine metabolism [PATH:xom00473]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:xom00550]

SSDB

Motif

Pfam:

Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 ATP-grasp CPSase_L_D2 RimK ATPgrasp_Ter

Other DBs

NCBI-GI:

84621981

NCBI-GeneID:

3856807

UniProt:

Q2P8P8

Structure

PDB:

3E5N 3R5F 3RFC

Position

355636..356739

AA seq 367 aa
MRKIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGIDKQGQWHVNDPDSFLLH
ADDPARIALHRSGRGVALLPGAQQQQLRPIQPEQALAQIDVVFPIVHGTLGEDGSLQGLL
RMANLPFVGSGVLGSAVAMDKDMAKRVLRDARLAVAPFVCFDRHTAAHADVDTLIAQLGL
PLFVKPANQGSSVGVSQVRTADAFAAALALALAYDHKVLVEAAVAGREIECAVLGNAVPH
ASVCGEVVVHDAFYSYATKYISEHGAEIVIPADIDAQTQQRIQQIAVQAYQALGCAGMAR
VDVFLCADGRIVINEVNTLPGFTRISMYPKLWQASGLDYRGLITRLIELALERHTDDQLL
RSAVELH

NT seq 1104 nt +upstreamnt +downstreamnt
atgcgcaagatccgggtcggcctcatcttcggcggcaaatcggccgagcacgaggtttcg
ttgcaatcggcgcgcaacatcctggatgcgctggacccgcaacgcttcgagccggtgctg
attggtatcgacaagcaaggccaatggcacgtcaacgaccccgacagcttcctgctccat
gccgacgacccggcacgtattgcgctgcatcgcagtggtcgcggggtggcactgctgccg
ggcgcgcaacagcagcaattgcggcccatccagccggagcaggcgctggcgcaaatcgat
gtggtgttccccatcgtgcacggcaccttgggcgaagacggctcgctgcaggggctgctg
cgcatggccaacctgcccttcgtgggctccggcgtgctgggctcggcggtggcgatggac
aaggacatggccaagcgcgtgttgcgcgatgccaggctggcggtggcaccgttcgtctgc
ttcgaccgccacaccgccgcgcacgccgatgtggatacgttgatcgcgcagctgggcttg
ccgttgttcgtcaaaccggccaaccagggctcatcggtcggcgtcagccaggtgcgcacg
gccgacgcattcgctgctgcactcgccttggcgttggcctatgaccataaggtgctggtg
gaagcggccgttgccgggcgcgaaatcgaatgcgccgtgctgggcaatgccgtgccacac
gcaagcgtctgcggcgaagtggtggtgcacgacgcattctattcgtacgcaaccaaatac
atcagcgaacacggtgccgagatcgtgattccggccgacatcgatgcgcagacccagcaa
cgcatccagcagatcgcagtgcaggcctaccaggcgctgggctgcgcaggcatggcgcgc
gtggacgtctttttgtgcgccgatgggcgcatcgtgatcaacgaggtcaacacgctgcca
ggcttcacccgcatcagcatgtatccgaaattatggcaggcaagcgggctggactatcgc
ggtctgattacgcggttgatcgagctcgcactggaacggcacacagacgaccaactgctg
cgcagcgcggtcgagctacactga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
3D Structure (3)   
   PDB (3)   
Protein domain (7)   
   Pfam (7)   
All databases (27)   

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