KEGG T00360: XOO

Xanthomonas oryzae pv. oryzae MAFF311018: XOO_1771

Entry

XOO_1771 CDS T00360

Definition

ATP-dependent DNA ligase (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

xom Xanthomonas oryzae pv. oryzae MAFF311018

Pathway

xom03410	Base excision repair
xom03420	Nucleotide excision repair
xom03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:xom03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:xom03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:xom03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C

Other DBs

NCBI-GI:

84623428

NCBI-GeneID:

3857397

UniProt:

Q2P4K1

Position

complement(1955083..1956687)

AA seq 534 aa
MKRFAALYRTLDRSTGTLDKRAALVAYFRDAPALDAAWALYLLAGGKVASARMRIAGSGE
LREWITDTAGIADWLVADSYDHVGDLAETLALLLDDPVTEAADLPLAEWIEQRLLPIANK
DVEVRKACIVQAWRSLAFDERLVFNKLLTGALRVGVSQRLVQQALAELSGMDTARIAQRM
LGSWRPHPTYLAELLTREELPGDRQQPYPFFLASPLEAEVQTLGAIDDWLLEWKWDGIRL
QLIRRAGEAALWSRGEERLDGRFPEIEHAALQLPDGTVIDGELLAWQPEQSLPMPFTALQ
TRIQRLKPGPKTLTAAPARVVAYDLLELDGADLRGRPLQERRGLLEGVLTTLADPRIVAS
PLVQVSDWHAAAQVRVEARERGVEGLMLKRAGSVYQSGRRRGDWWKWKIDPLTIDAVLLY
AQAGHGRRSTLYTDYTFGLWHEGQLVPIAKAYSGLDDSEILQLDRWIRANTTERFGPVRA
VTAHHVFELGVEAVNRSARHKSGIAVRFPRILRWRQDKPMADADHLSSLQALAR

NT seq 1605 nt +upstreamnt +downstreamnt
gtgaagcgtttcgcggcgttgtaccgcaccctggatcgcagcaccggcacgctcgacaag
cgcgccgcgctggtggcgtatttccgcgatgcgccggcgctggatgcggcgtgggcgctg
tatctgctggccggtggcaaggtggccagcgcgcgcatgcgcatcgccggcagcggcgaa
ttgcgcgagtggatcaccgacaccgccgggattgccgattggctggtggccgacagctac
gaccacgtcggcgatctggccgaaaccctggccttgctgctggacgatccggtcaccgaa
gcggccgatctgccactggcggagtggatcgaacagcgcctgctgccgatcgccaacaag
gacgtggaagtgcgcaaggcctgcatcgtgcaagcatggcgcagcctggccttcgacgag
cggctggtgttcaacaagctgctcaccggcgcgctgcgcgtgggcgtgtcgcagcggctc
gtgcagcaggcattggccgaattgtcgggcatggataccgcgcggattgcgcagcgcatg
ctcggcagttggcggccgcatccgacctatcttgcggagttgttgaccagagaagaactg
cccggcgatcgccagcagccctacccgttctttctggcatcgccgctggaagccgaggtc
caaacgctcggcgccatcgacgactggctgctggaatggaaatgggacggcatccgcctg
caactgattcggcgcgcaggcgaagcggccttgtggtcgcgcggcgaagagcgcctggac
ggtcgctttccagaaatcgaacacgccgcgctgcagttacccgacggcaccgtgatcgat
ggcgagctgctggcctggcaaccggagcagtccctgccgatgccatttactgcactgcag
acgcgcatccagcggctcaagcccgggcccaagaccttgaccgccgcgcccgcgcgtgtg
gtggcctacgacctgctggaactggatggcgcagacctgcgcgggcgcccgttgcaggag
cggcgcggattgctggaaggcgtcctcaccacgctggcagatccgcgcatcgtcgcctcg
ccgctggtgcaggtcagcgattggcacgccgcagcgcaggtacgtgtggaagcgcgcgag
cgcggggtggaaggactgatgctcaagcgcgccggttcggtgtatcaatccggtcgccgg
cgcggcgattggtggaaatggaagatcgacccgctcaccatcgatgccgtgctgctgtat
gcgcaggccggccacggccgacgcagcacgctctataccgattacaccttcgggctgtgg
cacgaaggccaactggtgccgatcgccaaggcgtattcgggtctggacgacagcgaaatt
ctgcagctggatcgttggatccgggccaatactaccgagcgcttcggcccggtgcgcgcg
gtcacggcgcatcatgtgttcgagctgggggttgaagcggtgaaccgtagcgcgcggcac
aaatccggcatcgcggtgcgcttcccgcgcatcctgcgctggcgtcaggacaagccgatg
gccgacgccgatcatctgagcagcctgcaggcactggcgcggtga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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