KEGG T00360: XOO

Xanthomonas oryzae pv. oryzae MAFF311018: XOO_3943

Entry

XOO_3943 CDS T00360

Definition

isocitrate dehydrogenase

Orthology

K00031

isocitrate dehydrogenase [EC:1.1.1.42]

Organism

xom Xanthomonas oryzae pv. oryzae MAFF311018

Pathway

xom00020	Citrate cycle (TCA cycle)
xom00480	Glutathione metabolism
xom01100	Metabolic pathways
xom01110	Biosynthesis of secondary metabolites
xom01120	Microbial metabolism in diverse environments
xom01210	2-Oxocarboxylic acid metabolism
xom01230	Biosynthesis of amino acids

Module

xom_M00009	Citrate cycle (TCA cycle, Krebs cycle)
xom_M00010	Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:xom00020]
Metabolism; Metabolism of other amino acids; Glutathione metabolism [PATH:xom00480]

SSDB

Motif

Pfam:

IDH Pectate_lyase

Other DBs

NCBI-GI:

84625600

NCBI-GeneID:

3858744

UniProt:

Q2NYC9

Position

complement(4440123..4442354)

AA seq 743 aa
MPNTPKILYTLTDEAPYLATQSLLPIIDAYTDTAGIVVETRDISLAGRILALFPEYLSDT
QKVADDLGELGELATTPEANIIKLPNISASVPQLKAAIKELQGQGYALPAYPDEPKDAAE
KDIKARYDKVKGSAVNPVLREGNSDRRAPLSVKNYARKHPHRMGKWSSDSKSHVSHMESG
DFFGSEQSTTLADAGTLKIEFVGADGSSTVLKDKVAVKAGEIVDAAVLSKRALASFIDAQ
IADAKARDVLFSVHLKATMMKVSDPVLFGVVVGEFYKDTLSRHADALKSVGFDPNNGIGD
LYARIGTLPEDQQARIKADIQAEYAQRPGLAMVNSDKGITNLHVPSDVIVDASMPAMIRD
SGQMWNAQGTLQDTKAVIPDRCYADVYQAVIDDCKAHGAFDPSTMGSVPNVGLMAQKAEE
YGSHDKTFQMAAAGTVKVTDGNGKTVFKHAVEAGDLWRMCQVKDAPIQDWVKLAVERARL
SDTPAVFWLDQARAHDAQVIAKVEQYLKDHDTNGLDIRILPPVEATAFSLERIRKGQDTI
SVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMAGGGLFETGAGGSAPKHVQQFVEENCL
RWDSLGEFLALAASLEHLGNRYDNPSATVLAKALDVANGQFLDNNKSPARKVGELDNRGS
HFYLAMYWAQALAAQTEDTALQGRFAPLARALTENEATIVAELNGAQGKPVDIGGYYHPD
LAKVSEAMRPSKTFNDILATLKA

NT seq 2232 nt +upstreamnt +downstreamnt
atgcctaatacccccaagatcctctacacgctcaccgacgaagcaccttacctggccacg
cagtcgctgctgccgatcatcgatgcctacaccgacaccgccggcatcgtggtcgaaacg
cgcgatatctcgctggccgggcgcatcctggcgctgtttcccgagtatttgagcgacacg
caaaaggttgccgacgatctgggcgaactcggtgagctggctaccacgccggaagccaac
atcatcaagctgcccaacatcagcgcctcggtgccgcagctcaaggctgcgatcaaggag
ctgcagggccagggctatgcgctgccggcgtatccggacgagcccaaggacgcagccgaa
aaagacatcaaggcacgctacgacaaggtcaagggcagtgcggtgaatccagtgctgcgc
gaaggcaattccgatcgtcgcgcaccgctgtcggtgaagaactatgcgcgcaagcacccg
caccgcatgggcaagtggagcagcgattccaagtcgcacgtgtcgcacatggagtctggc
gatttcttcggtagcgagcagtccaccacgctggccgacgccggcacgctcaagatcgaa
ttcgtcggtgccgacggcagcagcaccgtgctgaaggacaaggtcgcggtcaaagccggt
gaaatcgtcgatgccgcggtgttgagcaagcgcgcgctggccagcttcatcgacgcgcag
attgccgatgccaaggcccgcgacgtgctgttctcggtgcatctgaaagccaccatgatg
aaggtctccgatccggtgctgttcggtgtggtggtcggcgagttctataaggacacgctg
agcaggcatgccgatgcgctcaagtcggtcggcttcgatcccaacaacggcatcggcgat
ttgtacgcacgcatcggcacgttgccggaagaccagcaggcacggatcaaggccgatatc
caggccgaatacgcgcagcgccctgggctggcgatggtcaattcggacaagggcatcacc
aatctgcatgtgcccagcgacgtgatcgtcgatgcatccatgccggcgatgattcgcgac
tccggccagatgtggaacgcgcaaggcacgttgcaggataccaaggcggtgattccggac
cgttgctacgccgacgtgtatcaggcagtgatcgacgactgcaaggcgcacggcgcgttc
gatccgtccacaatgggctcggtgcccaatgtgggcttgatggcgcagaaggccgaagaa
tacggctcacacgacaagacctttcagatggccgctgccggcaccgtcaaggtcaccgat
ggcaatggcaagacggtgttcaagcatgccgtggaagccggcgatctgtggcgcatgtgt
caggtcaaggacgcgccgatccaggactgggtcaagcttgccgtcgagcgcgcacgtctg
agcgacaccccggccgtgttctggctggaccaggcacgcgcgcacgatgcgcaggtcatt
gccaaggtcgaacagtatctgaaggatcacgacaccaatggcctggatatccgcatcctg
ccgccggtggaagcgacggccttctcgctggagcgcatccgcaagggccaggacaccatc
tcggttaccggcaatgtgctgcgcgattacctcaccgacctgttcccgatcatggagctg
ggcaccagcgccaagatgctttccatcgtgccgctgatggcaggtggcggtctgttcgaa
accggtgccggtggttcggcgcccaaacatgtgcagcagttcgtcgaagaaaactgcctg
cgctgggattcgctgggggaattcctggccctggctgcctcgctggagcacctgggcaac
cgttacgacaatccgtcggccacggtgctggccaaggcgctggatgtcgccaacggccag
ttcctggacaacaacaagtcgccggcgcgcaaggtcggcgagctcgacaaccgcggcagt
catttctatctggcgatgtactgggcgcaagccctggccgcgcagaccgaagacactgcg
ctgcagggcaggttcgcgccgctggccagggccctgaccgagaacgaagccaccatcgtg
gccgagctcaacggcgcacagggcaagccggtggacatcggtggttactaccatcccgat
ctggccaaggtcagcgaagcgatgcgtccaagcaagaccttcaacgatatcctggccacg
ttgaaagcctga

All links

Pathway (9)   
   KEGG PATHWAY (7)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (29)   

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