KEGG   Xanthomonas oryzae pv. oryzae KACC 10331: XOO0002
Entry
XOO0002           CDS       T00235                                 
Symbol
dnaN
Name
(GenBank) DNA polymerase III beta chain
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
xoo  Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo03030  DNA replication
xoo03430  Mismatch repair
xoo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:xoo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    XOO0002 (dnaN)
   03430 Mismatch repair
    XOO0002 (dnaN)
   03440 Homologous recombination
    XOO0002 (dnaN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:xoo03032]
    XOO0002 (dnaN)
   03400 DNA repair and recombination proteins [BR:xoo03400]
    XOO0002 (dnaN)
Enzymes [BR:xoo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     XOO0002 (dnaN)
DNA replication proteins [BR:xoo03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     XOO0002 (dnaN)
DNA repair and recombination proteins [BR:xoo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     XOO0002 (dnaN)
SSDB
Motif
Pfam: DNA_pol3_beta DNA_pol3_beta_2 DNA_pol3_beta_3 DUF6212 Amino_oxidase
Other DBs
NCBI-ProteinID: AAW73256
UniProt: Q5H714
Position
1651..2751
AA seq 366 aa
MRFTLQREAFLKPLAQVVNVVERRQTLPVLANLLVQVKDGQVSLTGTDLEVEMIARTMAE
DVQDGETTIPARKLFDILRALPDGSRVTISQTGDKVTVQAGRSRFTLATLPANDFPSVDE
VEATERVVVPEAGLKELIERTAFAMAQQDVRYYLNGLLFDLRDGLLRCVATDGHRLALCE
MELENAGGAKRQIIVPRKGVTELLRLLEGADREVELEVGRSHIRVKRGDVTFTSKLIDGR
FPDYEAVIPIGADREVKVDREALRASLQRAAILSNEKYRGVRVEVSPGQLKISAHNPEQE
EAQEEIEADTKVDDLAIGFNVNYLLDALSALRDEHVVIQLRDANSSALVREASSEKSRHV
VMPLRL
NT seq 1101 nt   +upstreamnt  +downstreamnt
atgcgttttacactgcagcgcgaagccttcctcaaaccgttggcccaagtggtcaatgtg
gtcgaacgccgtcaaaccctgcctgttctggccaacttgctggtgcaggtcaaggacgga
caggtctcgttgaccggcacggatctggaagtcgaaatgatcgcgcgcacgatggcggag
gacgtgcaagacggcgaaaccaccattcccgcccgcaagctattcgacatcctgcgcgcc
ctgccggacggcagccgggtcaccatttcgcagaccggtgacaaggtgacagttcaggcc
gggcgtagccgtttcacgctggcgacgctgcctgcgaacgacttcccgtccgtggacgaa
gtcgaggcgaccgagcgcgtggtggtgcccgaggccgggctcaaagagctgatcgaacgc
acggcgtttgcgatggcacagcaggatgttcgctactacctcaacggcctgctgttcgac
ctgcgcgacggtttgctgcgctgcgtggccaccgacggccaccgtttggcgctatgcgag
atggagcttgagaatgctggcggcgccaagcgtcagatcatcgtgccgcgtaagggcgtg
accgagctgctgcgtttgctggaaggcgcagaccgtgaggtcgaattggaagtcggccgt
agccatatccgcgtcaagcgtggcgatgtaaccttcacttccaagctgatcgacggccgc
ttcccggactacgaggcagtgattccgattggcgccgatcgcgaggtcaaggttgatcgt
gaggcgctgcgtgcgtcgcttcagcgcgcggccatcctgtcgaacgaaaagtaccgtggc
gtgcgcgtggaagtatcgccaggccaattgaagatcagtgcgcacaacccagagcaagaa
gaagcgcaggaagagattgaggccgacaccaaggtcgacgacctggcgattggcttcaac
gtcaactatctgctcgatgcgttgtcggcattgcgcgatgagcacgtggtcatccagctg
cgagacgcgaattcgtccgcgctggtgcgcgaggccagcagtgagaagtcccgtcatgtg
gtgatgccgctgcgtctctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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