KEGG T00235: XOO3252

Xanthomonas oryzae pv. oryzae KACC10331: XOO3252

Entry

XOO3252 CDS T00235

Gene name

trpB

Definition

tryptophan synthase subunit beta (EC:4.2.1.20)

Orthology

K01696

tryptophan synthase beta chain [EC:4.2.1.20]

Organism

xoo Xanthomonas oryzae pv. oryzae KACC10331

Pathway

xoo00260	Glycine, serine and threonine metabolism
xoo00400	Phenylalanine, tyrosine and tryptophan biosynthesis
xoo01100	Metabolic pathways
xoo01110	Biosynthesis of secondary metabolites
xoo01230	Biosynthesis of amino acids

Module

xoo_M00023

Tryptophan biosynthesis, chorismate => tryptophan

Class

Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:xoo00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:xoo00400]

SSDB

Motif

Pfam:

PALP Phage_min_cap2

Other DBs

NCBI-GI:

122879248

NCBI-GeneID:

3265113

Position

complement(3489515..3490732)

AA seq 405 aa
MSAQPISDFYAYPDAAGHFGKFGGRFVAETLIGPLQELSAAYDQARQDPSFIAEYDKDLK
HYVGRPSPIYHAERLSREVGGAQILLKREDLNHTGAHKINNTIGQALLASRMGKTRIIAE
TGAGQHGVASATVAARLGLECLVYMGATDIERQKINVYRMKLLGATVIPVTSGSATLKDA
LNEAMRDWVTNVRDTFYIIGTVAGPDPYPRMVRDFNAIVGRESRAQMLEDYGRLPDAISA
CVGGGSNAIGLFHAFLNDPGVKIYGAEAAGDGIATGRHAASIAAGRPGVLHGNRTYVICD
DDGQITETHSISAGLDYPGVGPEHAFLSDSGRAVYQGITDDEAMAAFHLLAHTEGILAAL
ESSHAVAQSIKLARELPKDALVLCNLSGRGDKDVHTIAAREGLAL

NT seq 1218 nt +upstreamnt +downstreamnt
atgtcggcccagcccatcagtgacttttacgcctatccggatgctgctggccactttggc
aagtttggcggccggttcgtcgccgaaaccttgattggcccgctgcaggagctgtccgcc
gcctacgatcaagcgcggcaggatccgagcttcatcgccgaatacgacaaggacctcaag
cattacgtcggccgccccagcccgatctaccacgccgaacggctcagccgtgaagtgggt
ggggcgcagatcctgctcaagcgcgaagacctcaaccacaccggcgcgcacaagatcaac
aacaccatcggccaggccctgctggccagccgcatgggcaagacccgcatcatcgccgag
accggcgccggccagcacggcgtggccagcgccactgtcgctgcacgtctgggcctggaa
tgcctggtctacatgggcgccaccgacatcgaacggcagaagatcaacgtctatcgcatg
aagctgctcggtgcgacggtgatcccggtgacctccggttcggccacgctcaaggacgcg
ctcaacgaagcgatgcgcgactgggtcaccaacgtgcgcgacaccttctacatcatcggc
accgtggccggccctgacccgtatccgcgcatggtgcgtgacttcaacgcgattgtcggc
cgcgagtcgcgcgcgcagatgctggaagactacggccgtctgccggatgcgatcagcgcc
tgcgtcggtggcggtagcaatgcgatcggcctgttccatgccttcctcaacgacccgggc
gtcaagatctatggcgccgaggcggccggcgacggcatcgctaccggccgccatgcggca
tcgatcgccgcagggcgccccggtgtgttgcatggcaatcgcacctatgtgatttgcgac
gacgatggccagatcaccgaaacccattcgatctctgccggcctggattaccccggcgtg
ggtccggagcatgcgtttctgtccgacagcggccgcgcggtgtatcagggcattaccgac
gacgaggcgatggccgcgttccatctgcttgcgcataccgaaggcatcctggccgcactt
gaatccagccatgcggtggcgcagtcgatcaagctcgcgcgcgagctgccgaaagacgcg
ttggtgttgtgcaacctgtctgggcgtggcgacaaggatgtgcataccatcgcggcgcgc
gaggggctcgcgctgtag

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (24)   

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