KEGG X.oryzae: XOO3439

Xanthomonas oryzae KACC10331: XOO3439

Entry

XOO3439 CDS X.oryzae

Gene name dnaE2

Definition DNA polymerase III alpha chain

Orthology K02337 DNA polymerase III subunit alpha [EC:2.7.7.7]

Pathway xoo00230 Purine metabolism
xoo00240 Pyrimidine metabolism
xoo01100 Metabolic pathways
xoo03030 DNA replication
xoo03430 Mismatch repair
xoo03440 Homologous recombination

Class Metabolism; Nucleotide Metabolism; Purine metabolism [PATH:xoo00230]
Metabolism; Nucleotide Metabolism; Pyrimidine metabolism
[PATH:xoo00240]
Genetic Information Processing; Replication and Repair; DNA
replication [PATH:xoo03030]
Genetic Information Processing; Replication and Repair; Mismatch
repair [PATH:xoo03430]
Genetic Information Processing; Replication and Repair; Homologous
recombination [PATH:xoo03440]
Genetic Information Processing; Replication and Repair; DNA repair
and recombination proteins

SSDB

Motif Pfam: DNA_pol3_alpha PHP tRNA_anti GspK

Other DBs NCBI-GI: 58583062
NCBI-GeneID: 3264419
UniProt: Q5GX78

Position complement(3673285..3676536)

AA seq 1083 aa
MSWDDAIEGVDRDTPGGRMPRAWNVAARLRAANDDISHAHVADGVPTYAELHCLSDFSFL
RGASSAEQLFARAQHCGYSALAITDECSLAGIVRGLEASRVTGVRLIVGSEFTLIDGTRF
VLLVENAHGYPQVCGLVTTARRAASKGAYRLGRADVEAQFRDVAPGVFALWLPGVQPQAE
QGAWLQQVFGERAFLAVELHREQDDGARLQVLQALAQQLGMTAVASGDVHMAQRRERIVQ
DTLTAIRHTLPLAECGAHLFRNGERHLRTRRALGNIYPDALLQAAVALAQRCTFDISKIS
YTYPRELVPEGHTPTSYLRQLTEAGIRKRWPGGITAKVREDIEKELALIALKKYEAFFLT
VQDVVRFAREQNILCQGRGSSANSAVCYALGITAVNPDETRLLMARFLSEKRDEPPDIDV
DFEHERREEVLQYVYRKYGRERAALAATVICYRGKSAVRDVAKAFGLPPDQIALLANCYG
WGNGETPMEQRIEEAGFDLANPLINKILLVTEHLRDHPRHLSQHVGGFVISDEPLSLLVP
VENAAMADRTIIQWDKDDLETMKLLKVDCLALGMLTCIRKTLDLVRGHRGRDYSIATLPG
EDLPTYKMIQRADTVGVFQIESRAQMAMLPRLKPAEFYDLVIEVAIVRPGPIQGDMVHPY
LRRRQGREDVSYPSPAVEDILKPTLGVPLFQEQVMELLMHAADYTESEADNLRRSMAAWR
RGGDMEQHRMRVRERMQGKGYASTFIDQIFEQIKGFGSYGFPQSHAASFAKLVYASCWLK
RHEPAAFACGLLNAQPMGFYSASQIVQDARRGSPERERVEVLPVDVVHSDWDNTLVGGRP
WRSAADPGEQPAIRLGMRQVAGLSDVVAQRIVAARTQRAFADIGDLCLRAALDEKACLAL
AEAGALQGMVGNRNAARWAMAGVEARRPLLPGSPEERPVAFEAPHAGEEILADYRSVGLS
LRQHPMALLRPQMRQRRILGLRDLQGRPHGSGVHVAGLVTQRQRPATAKGTIFVTLEDEH
GMINVIVWSHLALRRRRALLESRLLAVRGRWERVDGVEHLIAGDLHDLSDLLGDMQLPSR
DFH

NT seq 3252 nt +upstreamnt +downstreamnt
atgagctgggatgacgccatcgagggtgtagaccgcgacacccccggcgggcgcatgccg
cgcgcctggaatgtggctgcacgcctgcgcgcggccaacgacgacatcagccatgcgcac
gttgccgatggggtgcccacgtatgccgaactgcactgcctgtcggacttctcgttcctg
cgtggcgcctccagtgccgagcagttgttcgcacgcgcgcagcattgcggctacagcgcc
ttggccatcaccgacgaatgctcgctggccggcatcgtgcgtggcctggaagcctcgcgc
gtcaccggcgtgcgactgatcgtcggcagcgaatttaccttgatcgatggaacccgcttc
gtgctgctggtggaaaacgcgcatggttacccgcaggtgtgcgggctggtcaccaccgcg
cggcgtgcggcaagcaagggtgcctatcgcttggggcgtgccgacgtggaagcgcagttt
cgcgatgtggcaccgggcgtatttgcgttgtggctgcccggcgtgcagccgcaggcagag
cagggcgcctggttgcaacaggtgttcggcgagcgtgcatttctggcagtggaattgcat
cgcgaacaggacgatggcgcccgcctgcaggtgctgcaagcgctggcgcagcaactgggc
atgaccgcggtggccagcggcgatgtgcatatggcgcagcgtcgcgagcggatcgtgcag
gacaccttgactgccatccgccacacgctgccgctggccgagtgcggcgcgcatctgttt
cgcaatggtgagcgccatctgcgcacccggcgcgccctgggtaacatctatcccgatgcg
ttgttgcaggccgcggtggcgttggcgcagcgctgcaccttcgatatttccaagatcagc
tatacctatcccagagagctggtgccggaaggccatacacccaccagctatctacgccag
ctcaccgaagccggcatccgcaagcgctggccgggcggcatcacggcaaaggtgcgcgag
gacatcgaaaaagagctggcgctgatcgcgctcaagaagtacgaagcgttcttcctcact
gtgcaagatgtggtgcgcttcgcacgcgagcagaacattctctgccagggccgtggctca
tcggccaattcggcggtgtgttatgcgttgggcatcacggcggtcaacccggatgaaacg
cgcctgttgatggcgcgctttctgtccgaaaaacgcgacgagccgccggacatcgacgtg
gacttcgagcacgaacgtcgcgaggaagtgctgcagtacgtctacagaaaatacgggcgc
gaacgcgcagcgctggcggcgacggtgatctgctatcgcggcaagagcgcggtgcgcgac
gtggccaaggcgttcggcctaccgccggaccagattgcgttgctggccaattgctacggc
tggggcaatggcgaaacgccgatggaacagcgcatcgaagaagccgggttcgatctggcc
aacccgctgatcaacaagatcttgcttgtgacagaacacctgcgtgaccacccgcggcat
ctgtcccagcatgtcggcggcttcgtcatctccgacgagccgttgtcgctgctggtgccg
gtggaaaacgctgcgatggccgaccgcaccatcatccagtgggacaaggacgatctggaa
accatgaagctgctcaaggtcgattgcctggcgctgggcatgctgacctgcatccgcaag
acgctggacctggtgcgcggccaccgcgggcgcgactacagcatcgccaccttgccgggt
gaggatctcccaacctacaagatgatccagcgcgcagacaccgtcggcgtcttccagatc
gaatcgcgtgcgcagatggcgatgctgccgcggctcaaacctgcagagttctacgacctg
gtcatcgaagtggcgatcgtgcggcccggcccgatccagggcgacatggtgcacccatat
ctgcgcaggcggcagggccgcgaagacgtgagctatccgtcgccggcggttgaagacatc
ctcaaaccaacattgggcgtgccgttgtttcaggagcaggtgatggagctgctgatgcat
gccgccgattacaccgaaagcgaagcagacaacttgcgtcgctcgatggcggcatggcgg
cgcggcggcgacatggagcagcatcgcatgcgtgtgcgcgaacgcatgcagggcaaaggc
tacgcctccaccttcatcgaccagatcttcgagcagatcaagggcttcggttcctacggg
tttccgcagagccacgccgcctcgttcgccaagctcgtctatgccagctgttggctcaaa
cgccacgaaccggccgcattcgcctgcgggctgctcaacgcacagccgatgggcttttat
tcggccagccagatcgtgcaggacgcgcgccgcggcagccccgagcgcgaacgtgtggag
gtgttgccggtcgatgtggtgcacagcgactgggacaacaccctggtcggcggccggccg
tggcgcagcgctgccgatcccggcgaacagccggcgatccggctgggcatgcggcaggtc
gctggattatcggacgtggtggcgcagcgcatcgtcgcggcacgtacgcaacgcgccttc
gccgatatcggcgatctgtgcctgcgcgccgcactcgacgaaaaagcgtgcctggccctg
gccgaagccggtgccttacaaggcatggtgggcaaccgcaacgccgcgcgctgggcaatg
gccggcgtagaggcacgtcgcccgctgttgccaggtagcccggaagagcgcccggtggcg
ttcgaagcaccgcacgcgggcgaagaaatcctcgccgattaccgctcggtcggcctgagt
ctgcgccagcatccgatggcgctgctgcgcccgcagatgcgtcagcggcgcatcctgggt
ctgcgcgacttgcagggccgcccccacggcagcggcgtgcatgtcgccggcctggtcacc
cagcgccagcgtccggccaccgccaagggcaccatcttcgtcaccctggaagacgagcac
ggcatgatcaacgtcatcgtctggtcgcacctggcgctacgtcgccgtcgcgcgctgttg
gaatcgcgcttgctcgcggtgcgcggccgctgggaacgcgtggacggcgtggagcacctc
attgccggcgacctgcacgatctcagcgacctgctcggcgacatgcagctgccgtcgcgc
gatttccattga

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)

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