KEGG T00235: XOO3824

Xanthomonas oryzae pv. oryzae KACC 10331: XOO3824

Entry

XOO3824 CDS T00235

Gene name

ddl

Definition

D-alanine--D-alanine ligase (EC:6.3.2.4)

Orthology

K01921

D-alanine-D-alanine ligase [EC:6.3.2.4]

Organism

xoo Xanthomonas oryzae pv. oryzae KACC 10331

Pathway

xoo00473	D-Alanine metabolism
xoo00550	Peptidoglycan biosynthesis
xoo01100	Metabolic pathways

Class

Metabolism; Metabolism of other amino acids; D-Alanine metabolism [PATH:xoo00473]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:xoo00550]

SSDB

Motif

Pfam:

Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 CPSase_L_D2 ATP-grasp_3 ATPgrasp_Ter ATP-grasp RimK DUF1205

Other DBs

NCBI-GI:

58583447

NCBI-GeneID:

3264602

UniProt:

Q5GW43

Position

complement(4079156..4080112)

AA seq 318 aa
MSAVIANARTSDPAIFGRVAVLLGGTSSEREVSLNSGSNVLEALRARGVDAQPVDGIAAL
AKALVAQQFDRVFNVLHGHNGGGEDGIVQGLMEAFGVPYTGSDVLGSALSMDKIRTKQVW
LSLGLSTPRYARLAAGASAADIHVAAQQLGLPVIVKPANEGSSVGVSRVFDQAQLEDAVT
LAARYDGALLMEQLIEGDELTVAVLGDTALPSIRIVPKGQWYDYNAKYIAEDTQYLCPGL
EGEPEAQIRQLALDAFRAAGCRGWGRVDVMRDGSSGQLYLLEVNTAPGMTSHSLVPKAAR
QLGIDFEELVWRVLEKTL

NT seq 957 nt +upstreamnt +downstreamnt
atgagcgcggtcatcgccaatgcccgcaccagcgatccggccatctttggccgcgtcgcc
gtgttgctcggcggcacttcgtccgagcgcgaggtgtccttgaactccggcagcaatgtg
ctggaagcgctgcgtgcgcgcggcgtcgatgcgcagccggtcgatggcattgcggcactg
gccaaggcgttggtcgcgcagcagtttgatcgcgtgttcaatgtgctgcacggccataac
ggcggcggcgaagacggcatcgtgcagggcctgatggaagctttcggcgtgccgtatacc
ggctcggatgtgcttggctcggcgttgagcatggacaagatccgtaccaaacaggtgtgg
ctgtcgctgggcctgtcgacaccgcgttacgcgcggttggctgctggcgccagcgccgcg
gacattcatgtcgcggcacaacagctcggtttaccggtcatcgtcaagccggccaatgaa
ggctcaagcgttggcgtcagccgcgtgttcgaccaggcacagctcgaagacgcagtgacc
ctggctgcccgctacgacggtgcgctgttgatggagcagttgatcgaaggcgacgaactg
accgttgcggtgctcggcgacaccgcgttgccgtccatccgcatcgtgcccaagggccag
tggtacgactacaacgccaagtacatcgccgaagacacgcagtatctgtgcccgggcctg
gaaggcgagcccgaagcgcagatccgccaacttgcgctcgatgcgttccgcgctgccggc
tgccgtggctggggccgcgtggacgtgatgcgcgatggcagcagcggccagctgtatctg
ctcgaagtgaacaccgctcccggcatgaccagccactcgctggtgcccaaggccgcccgc
cagctcggcatcgatttcgaagaactggtctggcgcgtgctggagaagacgctgtga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (26)   

Download RDF

DBGET integrated database retrieval system