KEGG T00235: XOO3923

Xanthomonas oryzae pv. oryzae KACC10331: XOO3923

Entry

XOO3923 CDS T00235

Gene name

lacZ

Definition

hypothetical protein

Orthology

K01190

beta-galactosidase [EC:3.2.1.23]

Organism

xoo Xanthomonas oryzae pv. oryzae KACC10331

Pathway

xoo00052	Galactose metabolism
xoo00511	Other glycan degradation
xoo01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:xoo00052]
Metabolism; Lipid metabolism; Sphingolipid metabolism
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:xoo00511]

SSDB

Motif

Pfam:

Glyco_hydro_2_N Glyco_hydro_2_C Glyco_hydro_2 BetaGal_dom4_5

Other DBs

NCBI-GI:

58583546

NCBI-GeneID:

3266100

Position

complement(4186730..4189627)

AA seq 965 aa
MRRREFLAGSVCASSLLGVPALVSGAAATTTTTRVGDGAKPRPTSQTAATDAGGQWLDLD
EGWRFHAGDVPFPRLLGQDETYANGKAGQAWGAAAPDFDDTGWRQLQLPHDFVVEQPVRA
DANVAQGYRPRGVAWYRRTFRLEEAVRGQAVELRLDGIASHATVWVNGMLLARSWSGYNG
LVIDITPVARYGNALNSIAIRVDAEAMDGWWYEGGGIYRHTWLVLRAPLHIAGDGLSAMP
REGPGDVWQVPVQLDLVNSGEQPADAWVEVVLRDAHGAVVAQGQTQLRLAAFDTAQAAIS
IAVPQPQRWSVDTPVLYRLQAEVRSADGRSDGAACEVGFRSLRFDADHGFFLNGRPLKIK
GVCLHQDHAGVGVALPDALHVFRLQRLKSMGCNAIRLHHAVAPELLQACDRLGMLVMAEN
RLFNPAPDYVALLRNMVRRQRNHPSVFLWSLLNEEPLQGTATGYAIMARAASAVRALDDT
RPITAAMNDGMFATRGAADVVDVLGFNYRQYNYDRVHAARPRTPMLSSEDTSAFQTRGAW
FTDLDAHVVAEDDSLAADWGNTHRRAWQLIAERPFVAGSFVWTGFDYRGEPTPFEWPSVG
SFFGIMDQCGFAKGAYWLRRVLWIEDAPVLHVLPHWNWPGREGQSIKVMAFCNAEQVELW
LNGRSLGKQAVDRTQSNQWHVDYVPGVLEAVAWRDGHELARTRVETTGAPVALKLTPDRS
ELRGDGRDAQPVTLEAVDAQGRHVPDCNALLTLQISGGRLLGVGNGDPNSHAADQRTQVA
LFNGLAQAIVQAGCSAGVLRLQARSPGLRDAVLEIGCTSAPLPASVPIVAPVMVVESWCH
TAAFAQPPAPDLARRANDNNSWSNTLPGTLESAPERAGHVLYRTQFTPWQGVQTHGGMLD
LGRLSGPAQVFLDGRAVVTAAAGTPIAVALAPAAGERTLAVILQVAADQPFGFHDVVTVH
YRNSP

NT seq 2898 nt +upstreamnt +downstreamnt
atgcgcaggcgtgagttccttgccggcagcgtctgtgcctcgtcgctgcttggcgtgccc
gcgctggtgtctggcgcggcagccaccaccacgaccacgcgtgttggcgatggcgccaag
ccgcgccccacgtcgcagacagcggcgacagatgccggcggccaatggctggatctggac
gaggggtggcgcttccacgccggcgatgtgccgtttccgcgcctgctggggcaggatgag
acgtatgccaatggcaaggcgggccaggcctggggcgcggcggcgccggacttcgacgat
accggttggcggcaactgcaattgccgcacgattttgtggtggagcaaccggtgcgtgca
gacgccaacgtcgcgcagggctatcgcccgcgcggtgtcgcctggtaccggcgcacgttc
cggctggaagaggcagtgcgcggccaggcggtggaactgcgtctggacggtatcgccagc
catgccacggtgtgggtcaacggcatgctgttggcgcgcagttggagcggctacaacggg
ctggtgatcgacatcacgcccgtcgcacgctacggcaatgcactgaacagcatcgccatc
cgcgtcgatgccgaggccatggatgggtggtggtacgaaggcggcggcatctaccgacac
acctggctggtgctgcgcgcgcccctgcatatcgccggcgacggcctgtcagcgatgccg
cgcgaaggcccgggcgatgtctggcaggtgccggtgcagctggaccttgtcaacagtggc
gaacaacccgctgacgcgtgggtcgaggtcgtcttgcgcgatgcgcatggcgctgtcgtg
gcgcaaggtcagacacaactgcggctcgctgccttcgacaccgcacaggcggcgatcagc
atcgcagtgccgcagccgcagcgctggagtgtggacacccccgtgctgtatcgcctgcaa
gccgaggtgcgcagcgcagatggccgcagcgacggtgccgcgtgcgaggttggttttcgt
agcctgcgcttcgacgccgaccacggattttttctcaatgggcgtccgctcaagatcaag
ggcgtctgcctgcatcaggaccatgccggcgtcggcgtggcgctacccgatgcactgcat
gtctttcgtctgcagcggctgaaatcgatgggctgcaatgccatccgcctgcaccacgca
gtggcgccggaactgttgcaggcctgcgaccgtctcggcatgctggtgatggccgaaaac
cgcctgttcaatcctgcgcccgactatgtggcgctgctgcgcaacatggtgcggcgccag
cgcaatcatcccagcgtgtttctgtggtcgctgctcaatgaagagccgctgcagggcacc
gctaccggttacgcgatcatggcgcgcgccgccagcgcagtgcgcgcgctcgacgacacc
cgtccgatcaccgccgcaatgaacgacggcatgttcgccacccgcggcgcggccgatgtg
gtggacgtgctcggtttcaactatcgccagtacaactacgaccgcgtgcatgcggcgcgt
ccgcgcacgccgatgctgtccagcgaagacaccagtgcgtttcagacgcgtggtgcgtgg
ttcaccgatctggacgcgcacgttgtggccgaagacgacagcctggcggcggattggggc
aatacccatcgccgcgcctggcagctgattgccgaacgcccgttcgtcgctggcagtttc
gtatggaccggtttcgattatcgcggcgaacccacaccgttcgaatggccatcggtaggg
tcgttcttcggcatcatggaccaatgcggatttgccaagggcgcctattggttgcgccgc
gtcttatggatcgaggatgcgccggtactgcacgtgttgccgcactggaactggcccggc
cgcgaaggccagtcgatcaaggtgatggcgttctgcaatgccgagcaggtggagctatgg
ctcaacggccgctcgctcgggaaacaggcggtggatcgtacgcaatccaatcaatggcac
gtggattacgtgccgggtgtgcttgaagcggtggcctggcgcgatggacacgaactggcg
cgcacgcgcgtggaaaccaccggcgcgccagtcgcgctcaaactcacccccgaccgcagc
gaactgcgcggcgatggccgcgacgcgcaaccggtgacgttggaggcggtggacgcgcag
gggcgtcacgtgcccgattgcaatgcactgctgaccctgcagatcagtggcggccggttg
ctgggtgtcggcaatggcgacccgaattcgcatgcagcggatcaacgcacgcaggtggcc
ttgttcaatggactggcccaggcaatcgtgcaggccgggtgcagcgcaggcgtgttgcga
ctgcaggcgcgtagcccgggattgcgcgatgcagtgcttgagatcggctgcacgtcggcg
ccgctgccggcgtcggtgccgatcgtggcgccagtgatggtggttgaaagctggtgccac
accgccgcattcgcgcagccgccggcgccggatctcgcgcgccgtgccaacgacaacaac
agctggagcaatacgctgcccggtacgttggaaagcgctcccgaacgtgcaggccatgtg
ttgtatcgcacgcaattcacgccctggcagggcgtgcaaacccacggcggcatgctcgac
ctgggccgcctcagcgggccggcgcaggtatttctggatggccgcgcggtcgtcacggca
gcggccggtacaccgatcgcggtggcgcttgcacccgcagctggcgagcgcacgctcgcg
gtgattctgcaggtcgctgccgatcaaccgtttggattccacgacgtcgtcaccgtgcat
tatcggaactcgccatga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (30)   

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