KEGG T00235: XOO4167

Xanthomonas oryzae pv. oryzae KACC10331: XOO4167

Entry

XOO4167 CDS T00235

Gene name

icd

Definition

isocitrate dehydrogenase

Orthology

K00031

isocitrate dehydrogenase [EC:1.1.1.42]

Organism

xoo Xanthomonas oryzae pv. oryzae KACC10331

Pathway

xoo00020	Citrate cycle (TCA cycle)
xoo00480	Glutathione metabolism
xoo01100	Metabolic pathways
xoo01110	Biosynthesis of secondary metabolites
xoo01120	Microbial metabolism in diverse environments
xoo01210	2-Oxocarboxylic acid metabolism
xoo01230	Biosynthesis of amino acids

Module

xoo_M00009	Citrate cycle (TCA cycle, Krebs cycle)
xoo_M00010	Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:xoo00020]
Metabolism; Metabolism of other amino acids; Glutathione metabolism [PATH:xoo00480]

SSDB

Motif

Pfam:

IDH Pectate_lyase

Other DBs

NCBI-GI:

58583790

NCBI-GeneID:

3263353

UniProt:

Q5GV52

Position

complement(4442650..4444914)

AA seq 754 aa
MIPLPEVVQRTMPNTPKILYTLTDEAPYLATQSLLPIIDAYTDTAGIVVETRDISLAGRI
LALFPEYLSDTQKVADDLGELGELATTPEANIIKLPNISASVPQLKAAIKELQGQGYALP
AYPDEPKDAAEKDIKARYDKVKGSAVNPVLREGNSDRRAPLSVKNYARKHPHRMGKWSSD
SKSHVSHMESGDFFGSEQSTTLADAGTLKIEFVGADGSSTVLKDKVAVKAGEIVDAAVLS
KRALASFIDAQIADAKARDVLFSVHLKATMMKVSDPVLFGVVVGEFYKDTLSRHADALKS
VGFDPNNGIGDLYARIGTLPEDQQARIKADIQAEYAQRPGLAMVNSDKGITNLHVPSDVI
VDASMPAMIRDSGQMWNAQGTLQDTKAVIPDRCYADVYQAVIDDCKAHGAFDPSTMGSVP
NVGLMAQKAEEYGSHDKTFQMAAAGTVKVTDGNGKTVFKHAVEAGDLWRMCQVKDAPIQD
WVKLAVERARLSDTPAVFWLDQARAHDAQVIAKVEQYLKDHDTNGLDIRILPPVEATAFS
LERIRKGQDTISVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMAGGGLFETGAGGSAPK
HVQQFVEENCLRWDSLGEFLALAASLEHLGNRYDNPSATVLAKALDVANGQFLDNNKSPA
RKVGELDNRGSHFYLAMYWAQALAAQTEDTALQGRFAPLARALTENEATIVAELNGAQGK
PVDIGGYYHPDLAKVSEAMRPSKTFNDILATLKA

NT seq 2265 nt +upstreamnt +downstreamnt
ttgatcccccttccagaggtcgttcagcgcaccatgcctaatacccccaagatcctctac
acgctcaccgacgaagcaccttacctggccacgcagtcgctgctgccgatcatcgatgcc
tacaccgacaccgccggcatcgtggtcgaaacgcgcgatatctcgctggccgggcgcatc
ctggcgctgtttcccgagtatttgagcgacacgcaaaaggttgccgacgatctgggcgaa
ctcggtgagctggctaccacgccggaagccaacatcatcaagctgcccaacatcagcgcc
tcggtgccgcagctcaaggctgcgatcaaggagctgcagggccagggctatgcgctgccg
gcgtatccggacgagcccaaggacgcagccgaaaaagacatcaaggcacgctacgacaag
gtcaagggcagtgcggtgaatccagtgctgcgcgaaggcaattccgatcgtcgcgcaccg
ctgtcggtgaagaactatgcgcgcaagcacccgcaccgcatgggcaagtggagcagcgat
tccaagtcgcacgtgtcgcacatggagtctggcgatttcttcggtagcgagcagtccacc
acgctggccgacgccggcacgctcaagatcgaattcgtcggtgccgacggcagcagcacc
gtgctgaaggacaaggtcgcggtcaaagccggtgaaatcgtcgatgccgcggtgttgagc
aagcgcgcgctggccagcttcatcgacgcgcagattgccgatgccaaggcccgcgacgtg
ctgttctcggtgcatctgaaagccaccatgatgaaggtctccgatccggtgctgttcggt
gtggtggtcggcgagttctataaggacacgctgagcaggcatgccgatgcgctcaagtcg
gtcggcttcgatcccaacaacggcatcggcgatttgtacgcacgcatcggcacgttgccg
gaagaccagcaggcacggatcaaggccgatatccaggccgaatacgcgcagcgccctggg
ctggcgatggtcaattcggacaagggcatcaccaatctgcatgtgcccagcgacgtgatc
gtcgatgcatccatgccggcgatgattcgcgactccggccagatgtggaacgcgcaaggc
acgttgcaggataccaaggcggtgattccggaccgttgctacgccgacgtgtatcaggca
gtgatcgacgactgcaaggcgcacggcgcgttcgatccgtccacaatgggctcggtgccc
aatgtgggcttgatggcgcagaaggccgaagaatacggctcacacgacaagacctttcag
atggccgctgccggcaccgtcaaggtcaccgatggcaatggcaagacggtgttcaagcat
gccgtggaagccggcgatctgtggcgcatgtgtcaggtcaaggacgcgccgatccaggac
tgggtcaagcttgccgtcgagcgcgcacgtctgagcgacaccccggccgtgttctggctg
gaccaggcacgcgcgcacgatgcgcaggtcattgccaaggtcgaacagtatctgaaggat
cacgacaccaatggcctggatatccgcatcctgccgccggtggaagcgacggccttctcg
ctggagcgcatccgcaagggccaggacaccatctcggttaccggcaatgtgctgcgcgat
tacctcaccgacctgttcccgatcatggagctgggcaccagcgccaagatgctttccatc
gtgccgctgatggcaggtggcggtctgttcgaaaccggtgccggtggttcggcgcccaaa
catgtgcagcagttcgtcgaagaaaactgcctgcgctgggattcgctgggggaattcctg
gccctggctgcctcgctggagcacctgggcaaccgttacgacaatccgtcggccacggtg
ctggccaaggcgctggatgtcgccaacggccagttcctggacaacaacaagtcgccggcg
cgcaaggtcggcgagctcgacaaccgcggcagtcatttctatctggcgatgtactgggcg
caagccctggccgcgcagaccgaagacactgcgctgcagggcaggttcgcgccgctggcc
agggccctgaccgagaacgaagccaccatcgtggccgagctcaacggcgcacagggcaag
ccggtggacatcggtggttactaccatcccgatctggccaaggtcagcgaagcgatgcgt
ccaagcaagaccttcaacgatatcctggccacgttgaaagcctga

All links

Pathway (9)   
   KEGG PATHWAY (7)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (29)   

Download RDF

DBGET integrated database retrieval system