KEGG T00763: PXO

Xanthomonas oryzae pv. oryzae PXO99A: PXO_01736

Entry

PXO_01736 CDS T00763

Definition

ATP-dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

xop Xanthomonas oryzae pv. oryzae PXO99A

Pathway

xop03410	Base excision repair
xop03420	Nucleotide excision repair
xop03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:xop03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:xop03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:xop03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C

Other DBs

NCBI-GI:

188577263

NCBI-GeneID:

6306581

UniProt:

B2SRV8

Position

3148709..3150313

AA seq 534 aa
MKRFAALYRTLDRSTGTLDKRAALVAYFRDAPALDAAWALYLLAGGKVASARMHIAGSGE
LREWITDTAGIADWLVADSYDHVGDLAETLALLLDDPVTEAADLPLAEWIEQRLLPIANK
DVEVRKACIVQAWRSLAFDERLVFNKLLTGALRVGVSQRLVQQALAELSGMDTARIAQRM
LGSWRPHPTYLAELLTSEELPGDRQQPYPFFLASPLEAEVQTLGAIDDWLLEWKWDGIRL
QLIRRAGEAALWSRGEERLDGRFPEIEHAALQLPDGTVIDGELLAWQPEQSLPMPFTALQ
TRIQRLKPGPKTLTAAPARVVAYDLLELDGADLRGRPLQERRALLEGVLTTLADPRIVAS
PLVQVSDWHAAAQVRVEARERGVEGLMLKRAGSVYQSGRRRGDWWKWKIDPLTIDAVLLY
AQAGHGRRSTLYTDYTFGLWHEGQLVPIAKAYSGLDDSEILQLDRWIRANTTERFGPVRA
VTAHHVFELGFEAVNRSARHKSGIAVRFPRILRWRQDKPMADADHLSSLQALAR

NT seq 1605 nt +upstreamnt +downstreamnt
gtgaagcgtttcgcggcgttgtaccgcaccctggatcgcagcaccggcacgctcgacaag
cgcgccgcgctggtggcgtatttccgcgatgcgccggcgctggatgcggcgtgggcgctg
tatctgctggccggtggcaaggtggccagcgcgcgcatgcacatcgccggcagcggcgaa
ttgcgcgagtggatcaccgacaccgccgggattgccgattggctggtggccgacagctac
gaccacgtcggcgatctggccgaaaccctggccttgctgctggacgatccggtcaccgaa
gcggccgatctgccactggcggagtggatcgaacagcgcctgctgccgatcgccaacaag
gacgtggaagtgcgcaaggcctgcatcgtgcaagcatggcgcagcctggccttcgacgag
cggctggtgttcaacaagctgctcaccggcgcgctacgcgtgggcgtgtcgcagcggctc
gtgcagcaggcattggccgaattgtcgggcatggataccgcgcggattgcgcagcgcatg
ctcggcagttggcggccgcatccgacctatcttgcggagttgttgaccagcgaagaactg
cccggcgatcgccagcagccctacccgttctttctggcatcgccgctggaagccgaggtc
caaacgctcggcgccatcgacgactggctgctggaatggaaatgggacggcatccgcctg
caactgattcggcgcgcaggcgaagcggccttgtggtcgcgcggcgaagagcgcctggac
ggtcgctttccagaaatcgaacacgccgcgctgcagttacccgacggcaccgtgatcgat
ggcgagctgctggcctggcaaccggagcagtccctgccgatgccatttactgcactgcag
acgcgcatccagcggctcaagcccgggcccaagaccttgaccgccgcgcccgcgcgtgtg
gtggcctacgacctgctggaactggatggcgcagacctgcgcgggcgcccgttgcaggag
cggcgcgcattgctggaaggcgtcctcaccacgctggcagatccgcgcatcgtcgcctcg
ccgctggtgcaggtcagcgattggcacgccgcagcgcaggtacgtgtggaagcgcgcgag
cgcggggtggaaggactgatgctcaagcgcgccggttcggtgtatcaatccggtcgccgg
cgcggcgattggtggaaatggaagatcgacccgctcaccatcgatgccgtgctgctgtat
gcgcaggccggccacggccgacgcagcacgctctataccgattacaccttcgggctgtgg
cacgaaggccaactggtgccgatcgccaaggcgtattcgggtctggacgacagcgaaatt
ctgcagctggatcgttggatccgggccaataccaccgagcgcttcggcccggtgcgcgcg
gtcacggcgcatcatgtgttcgagctggggtttgaagcggtgaaccgtagcgcgcggcac
aaatccggcatcgcggtgcgcttcccgcgcatcctgcgctggcgtcaggacaagccgatg
gccgacgccgatcatctgagcagcctgcaggcactggcgcggtga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

Download RDF

DBGET integrated database retrieval system