KEGG   Xanthomonas oryzae pv. oryzicola BLS256: XOC_2977
Entry
XOC_2977          CDS       T01873                                 
Name
(GenBank) hypothetical protein
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
xor  Xanthomonas oryzae pv. oryzicola BLS256
Brite
KEGG Orthology (KO) [BR:xor00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:xor03009]
    XOC_2977
Enzymes [BR:xor01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     XOC_2977
Ribosome biogenesis [BR:xor03009]
 Prokaryotic type
  ribosomal protein modification factors
   XOC_2977
SSDB
Motif
Pfam: Radical_SAM UPF0004 TRAM_2 CLP1_P TRAM
Other DBs
NCBI-ProteinID: AEQ97076
UniProt: G7TL34
Position
complement(3044347..3045711)
AA seq 454 aa
MSQLNPKVGFVSLGCPKALVDSERILTQLRVEGYDIVPSYDAADVVVVNTCGFIDSAVTE
SLDAIGEAMSANGKVIVTGCLGKRPEQIREAYPQVLAVSGPQDYQSVMEAVHAALPPRHD
PFVDLVPDYGIKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVDEVLREAERLVR
GGVKELLVVSQDTSAYGVDLKYAERPWRDRMYQTRMKALCEGLSELGVWTRLHYVYPYPH
VDDVLPLMAEGKLLPYLDIPFQHASPRILKLMKRPGAVEKTLQRVQRWKAMCPEITVRST
FIVGFPGETDAEFESLLDFLDQAQLDRVGAFAYSPVDGASANALPDPVPEEVKQERLARF
MAKQAEISALRLEAKIGSVHQCLVDLIEDDIAVARSRADAPEIDGLVHIQNGGELGLKVG
DLVDVEITDSDEHDLFGDALPVKGNRGIELAVIS
NT seq 1365 nt   +upstreamnt  +downstreamnt
atgtcccagctgaaccccaaagtcggcttcgtcagccttggctgcccgaaggcgctcgtc
gattccgaacgcatcctcacccagctgcgcgtggagggctacgacatcgtgcccagttac
gacgctgccgacgtggtggtggtcaacacctgcggcttcatcgattcggcagtgaccgag
tcgctggacgcgatcggcgaggcgatgagcgccaacggcaaggtcatcgtcaccggctgc
ttgggcaagcgcccggagcagattcgtgaggcgtacccgcaggtactggcggtgtccggc
ccacaggactaccagagcgtgatggaggcggtgcacgccgctttgccgccgcgtcacgac
cccttcgtggatctggtgccggactacggcatcaagctgaccccgcgccattacgcgtat
ctcaagatttccgaaggctgcaatcaccgctgcagcttctgcatcattccctcgatgcgc
ggcgatctcgtctcgcgtccggtcgatgaggtgctgcgcgaagccgagcggttggtgcgc
ggtggcgtcaaggaattgctggtggtgtcgcaagacacctccgcctacggcgttgacctg
aagtacgccgagcgcccgtggcgcgaccgcatgtaccagacccgcatgaaggcgctgtgc
gagggcttgtcggagctgggcgtgtggacgcgcctgcattacgtgtacccgtatccgcat
gtggacgatgtgcttccgctgatggccgaaggcaagctgctgccgtatctggacatcccg
ttccagcacgccagcccgcgcatcctcaagttgatgaaacgtcccggtgcagtggaaaag
accctgcagcgcgtgcagcgctggaaggcgatgtgcccggagatcaccgtgcgttcgacc
ttcattgtcggtttccccggcgaaaccgatgccgagtttgaatctttgctggacttcctg
gatcaggcgcaactggaccgcgtcggtgcgttcgcgtactcgccggtcgatggcgccagc
gccaatgcactgccggacccggtgccggaagaagtgaagcaggagcgcctggcgcgcttc
atggccaaacaggcggagatttctgcgttgcgtctggaggccaagatcggcagcgtgcac
cagtgccttgttgatctaatcgaagacgacatcgccgtggcgcgctcacgcgccgatgcg
ccggagatcgatggcctggtgcatatccagaacggcggcgagctcggcttgaaggtgggc
gatttggtggatgtggaaatcaccgacagcgacgagcacgatctgtttggtgatgcactg
ccggtaaaaggcaatcgcgggattgaacttgcggtgattagctag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

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