KEGG   Xanthomonas oryzae pv. oryzae PXO86: AZ54_19210
Entry
AZ54_19210        CDS       T03765                                 
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
xoy  Xanthomonas oryzae pv. oryzae PXO86
Pathway
xoy03030  DNA replication
xoy03430  Mismatch repair
xoy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:xoy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AZ54_19210
   03430 Mismatch repair
    AZ54_19210
   03440 Homologous recombination
    AZ54_19210
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:xoy03032]
    AZ54_19210
   03400 DNA repair and recombination proteins [BR:xoy03400]
    AZ54_19210
Enzymes [BR:xoy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AZ54_19210
DNA replication proteins [BR:xoy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AZ54_19210
DNA repair and recombination proteins [BR:xoy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AZ54_19210
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 DNA_pol3_tau_5 AAA RuvB_N AAA_16 AAA_22 AAA_14 AAA_5 ResIII AAA_7 AAA_18 AAA_19 PIF1 Mg_chelatase nSTAND3 AAA_24 TsaE AAA_2 TniB SKI
Other DBs
NCBI-ProteinID: AJQ84466
Position
complement(3977478..3979574)
AA seq 698 aa
MSYLVLARKWRPKRFAELVGQEHVVRALSNALDSGRVHHAFLFTGTRGVGKTTIARIFAK
SLNCETGTSADPCGQCPACLDIDAGRYIDLLEIDAASNTGVDDVREVIENAQYMPSRGKF
KVYLIDEVHMLSKAAFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKRLDE
DQIQGQMTRILAAEQIESDLSAIVQLSKAADGSLRDGLSLLDQAIAYAGGALREDVVRTM
LGTVDRTQVGAMLQSLADGDGARLMQVVAALAEFSPDWSGVLEALAEALHRVQVQQLVPS
VAFVGDGIDPTPFAAQLRPEVVQLWYQMALNGRRDLYLAPSPRAGFEMAVLRMLAFRPAA
AVPAGGSDDGRGTTAGGGARSAAAGSQAAAPALAAPVTAAPPMVAATAAVTDTMPVAAAE
ASLPASATQATPTPAAAPAPAPVVMLPPQESSSPSRASAASARIDDTPPWAVDDAPVRTQ
ATTASDTMAVLAPEAAMASPSSAPVELAQPVAIASDAAEDAPVSVATSSPAALVEPSSFA
EPAVVTPPATAVSAADSAADASALLDDGCIADAEQWLELVTRSGLNGPSRQLAANAAFIG
HRDGVLRLALAPGFEYLHSERSIANLAQALAPVLGNTPRIVIETGSADVETLHERANRQK
GERQSAAETAFMNDPTVQLLIQQQGARIVPDSIRPYDE
NT seq 2097 nt   +upstreamnt  +downstreamnt
atgtcctatctcgttctcgcccgcaagtggcgcccgaagcgttttgccgaactcgtaggc
caggaacacgtggtccgcgcgctcagtaacgcgctcgacagtgggcgcgtgcatcacgcg
ttcctgttcaccggcacccgcggcgtgggcaagaccaccattgcgcgcatcttcgccaag
tcgctcaactgcgagaccggtacaagtgccgacccatgcggccagtgcccggcctgcctg
gacatcgacgccggtcgttacatcgacctgctggagatcgatgccgcgtccaacaccggc
gtggacgatgtgcgcgaggtgatcgagaacgcgcagtacatgccctcgcgcggcaagttc
aaggtttacctgatcgacgaagtgcacatgctgtccaaggcggcgttcaatgcgctgctc
aagacgctggaagagccgccggagcacgtgaagttcctgctggctaccaccgacccgcag
aaattgccggtgacggtgctgtcgcgctgcttgcagttcaacctcaagcggctggacgag
gaccagattcagggccagatgacccgcatcctggccgccgagcagatcgaatcggatctg
tcggcgattgtgcagctgtccaaggcagccgacggctcgttgcgcgatggcctgtcgctg
ctggatcaggcgatcgcctatgccggcggcgcgctgcgcgaggacgtggtgcgcaccatg
ttgggcacggtcgatcgcacccaggtcggcgcgatgctgcaatcgctggccgatggcgat
ggcgcgcgcctgatgcaggtcgtggccgcgctggctgagttttcgcccgattggagcggg
gtgttggaggccctggccgaggcgttgcatcgcgtgcaggtgcagcagctggtgccgtcg
gtggcctttgttggcgacggcatcgacccgactccttttgcggcgcagttgcggccggaa
gtggtgcagctgtggtaccagatggcgctcaacgggcgtcgtgatctgtatctggcgccc
agtccgcgcgctggcttcgagatggcagtgctgcgcatgctcgccttccgccccgctgcg
gcggtgccggctggcggctcggacgacggacgcggcaccacggcgggcggtggtgcgcgt
tctgccgctgccggcagtcaggctgctgcgccggcactggcagcgccggtgacagctgcg
ccccccatggtggccgcgactgctgcggtgacggatacgatgcctgtggcggcggcggag
gcgtccctgccggcatccgcgacccaggcaactccgactccggccgcagctccggcgccg
gctcccgttgtcatgcttcctccccaagaatcttcttcgcccagtcgcgcgtctgcagcc
agcgcgcgcattgacgacacgccgccgtgggcagtggacgatgcgccggtgcgcacgcag
gccacaactgcgtccgacacgatggccgtgcttgcgcctgaagccgcgatggcttcgccg
tcgtccgcacccgtcgagctcgcacaacccgttgcgatcgcgtccgacgccgcagaggac
gctccggtttcggttgcaacatcttcgccggccgcgcttgtcgagccctcatcgtttgca
gagccagcagtggtcacgccaccagcaacggcagtatccgcagcagactcagcagccgat
gcatcggctttgctcgacgacggctgtatcgccgatgccgagcaatggctggagctggtc
acgcgcagtggcttgaatggaccgtcgcggcagctggccgccaacgccgcgtttatcggt
catcgcgatggcgtgctgcggctggcgctggcgccgggttttgaatatctccattccgag
cgctccatcgccaacctcgcgcaggcgttggcaccggtgttgggaaacacgccgcgcatc
gtcatcgaaaccggtagcgccgatgtcgaaaccttgcacgagcgtgccaaccgccagaaa
ggcgagcgccagagcgcggccgaaacagcctttatgaacgacccgacggtgcagctgctg
atccagcagcaaggcgcgcggatcgtccccgattccatccgcccttacgacgagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (21)   
   Pfam (21)   
All databases (33)   

Download RDF
DBGET integrated database retrieval system