KEGG   Xanthomonas oryzae pv. oryzicola CFBP7342: BE73_04305
Entry
BE73_04305        CDS       T03868                                 
Name
(GenBank) RNA helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
xoz  Xanthomonas oryzae pv. oryzicola CFBP7342
Pathway
xoz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:xoz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BE73_04305
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xoz03019]
    BE73_04305
Enzymes [BR:xoz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     BE73_04305
Messenger RNA biogenesis [BR:xoz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     BE73_04305
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 P-loop_SecA HEM4
Other DBs
NCBI-ProteinID: AJQ86412
Position
complement(868097..869479)
AA seq 460 aa
MSFESLGLAPFLLRALAEQGYETPTAIQQQAIPLVLAGHDLLAGAQTGTGKTAAFGLPLL
QHLGTSPQPVNGPRKPRALILTPTRELATQVHDSLRGYSKYLRIPSAVIYGGVGMGNQLD
TLRRGVDLLIACPGRLIDHIERRSVDLSGIEVLILDEADRMLDMGFLPSIKRILTKLPRQ
DRQTLLFSATFEENIKQLALEFMRNPMQIQVTPSNTVAESITHRVHPVDGARKRDLLLHL
LAQDSREQTLVFARTKHGSDKLALFLEKSGIKTAAIHGNKSQGQRMRALSDFKAGRVTVL
VATDIAARGIDIDQLPKVINYDLPMVAEDYVHRIGRTGRNGSTGEAISLVAQDEAKLLRQ
IVRMLGRDVEIRDVPGYEPQTPIRWGNSAPGRAEQPGGDRAPRKSHTRRPHGDAPRQAHA
HAGPKKPGGQRSGGPRQANAGAGAGRRDGGRGGQRPSGTR
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgtcttttgaatccctgggccttgcgcccttcctgctgcgcgcgttggccgagcagggc
tatgaaacccccactgcaatccagcagcaggcgatcccgttggtgctggccggtcacgac
ctgctggccggcgcgcagaccggtaccggcaaaaccgccgccttcggcctgccgctgctg
cagcacctgggcacctcgccgcagccggtcaacggcccgcgcaagccgcgcgcgctgatc
ctgacccccacccgcgaactggccacccaggtgcatgacagcctgcgcggctacagcaag
tacctgcgcattcccagcgcagtgatctacggcggcgtgggcatgggcaaccagctcgac
accctgcgccgtggcgtggacctgctgatcgcctgcccgggccggttgatcgaccatatc
gagcgccgcagcgtggacctgtccggcatcgaagtgctgatcctggacgaagccgaccgc
atgctcgacatgggcttcttgccgtcgatcaagcgcatcctgaccaagctgccgcgccag
gaccgtcagaccctgctgttctcggcgacctttgaagagaacatcaagcagctggcgctg
gagttcatgcgcaacccgatgcagatccaggtcaccccgagcaacaccgtggccgagagc
atcacccaccgcgtgcacccggtcgatggcgcgcgcaagcgcgatctgctgctgcacctg
ctggcgcaggacagccgcgaacagaccctggtgtttgcgcgcaccaagcacggcagcgac
aagctggcgctgttcctggagaagtcgggcatcaagaccgcggccatccacggcaacaag
agccagggccagcgcatgcgtgccctgagcgacttcaaggccggccgcgtgaccgtgctg
gtcgccaccgatatcgctgcgcgcgggatcgatatcgaccagctgccgaaggtcatcaac
tacgacctgccgatggtggccgaggattacgtgcaccgcatcggccgcaccggccgtaac
ggctccaccggcgaggcgatctcgctggtggcgcaggacgaagccaagctgctgcgtcag
atcgtgcgcatgctgggccgcgacgtggaaatccgcgacgtgccgggctacgagccgcag
acgccgatccgttggggaaacagcgcaccgggtcgcgccgagcagccgggcggcgatcgc
gccccgcgcaagagccacacccgtcgcccgcatggggatgcaccgcgtcaggcgcacgcg
catgccggcccgaagaagccgggtggccagcgcagcggcgggccgcgtcaggccaacgct
ggcgcgggtgcaggccgtcgcgacggcggtcgcggtggccagcgtccgagcggtacgcgc
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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