KEGG   Xanthomonas perforans: BJD13_07925
Entry
BJD13_07925       CDS       T04778                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
xpe  Xanthomonas perforans
Pathway
xpe02024  Quorum sensing
xpe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:xpe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BJD13_07925
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BJD13_07925
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xpe03019]
    BJD13_07925
   03036 Chromosome and associated proteins [BR:xpe03036]
    BJD13_07925
Messenger RNA biogenesis [BR:xpe03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     BJD13_07925
Chromosome and associated proteins [BR:xpe03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    BJD13_07925
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: APO99008
UniProt: A0A0G9CY72
Position
complement(1451593..1451871)
AA seq 92 aa
MAKGQSLQDPFLNALRRERVPVSVYLVNGIKLQGTIESFDQFVVLLRNTVSQMVYKHAIS
TVVPARNVRVGPGGGYVQSNEGNQAEDDDVEQ
NT seq 279 nt   +upstreamnt  +downstreamnt
atggctaaggggcaatctttacaggacccattcctcaatgcgctgcggcgcgagcgggtg
cccgtgtcggtgtatctggtcaatggcatcaagctgcagggcacgatcgagtcgttcgac
caattcgtggtcctgctgcgcaataccgtgagtcagatggtgtacaagcacgccatttcc
acggtggtgccggcgcgcaatgtgcgcgtggggcctggtggtgggtatgtgcaatccaat
gaaggcaatcaggcggaagatgacgacgtcgagcagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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