KEGG   Xanthomonas translucens pv. undulosa: FD63_05215
Entry
FD63_05215        CDS       T03961                                 
Name
(GenBank) ATP-dependent DNA helicase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
xtn  Xanthomonas translucens pv. undulosa
Pathway
xtn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:xtn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FD63_05215
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xtn03019]
    FD63_05215
   03400 DNA repair and recombination proteins [BR:xtn03400]
    FD63_05215
Enzymes [BR:xtn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FD63_05215
Messenger RNA biogenesis [BR:xtn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     FD63_05215
DNA repair and recombination proteins [BR:xtn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      FD63_05215
SSDB
Motif
Pfam: RQC DEAD HRDC RecQ_Zn_bind Helicase_C ResIII
Other DBs
NCBI-ProteinID: AKK66921
Position
complement(1171453..1173261)
AA seq 602 aa
MQSSAHSVLNRVFGYDQFRGPQQDIVEHVAAGQDALVLMPTGGGKSLCYQIPSLLRDGTG
LVISPLIALMQDQVEALRQLGVRAEYLNSTLDAETAQRVERELLAGELDLLYVAPERLLT
PRFLSLLERSRIALFAIDEAHCVSQWGHDFRPEYRQLTVLHERWPQIPRIALTATADPPT
QREIAERLDLTQARHFVSSFDRPNIRYTVVQKENSKRQLLDFLRAHRGSAGIVYCMSRRK
VEETAEFLAKEGLNALPYHAGLPAEVRAGNQRRFLREDGIVMCATIAFGMGIDKPDVRFV
AHTDLPKSLEGYYQETGRAGRDGEAAEAWLCYGLGDVVLLKQMIEKGEAGEDRKRVERRK
LDQLLGYCESMQCRRQVLLAGFGETYPQPCGNCDNCLTPAAAWDATVAVQKALSCVYRSG
QRFGVGHLIDILRGSDGEKIKQFGHDRLSTYGIGKDLDARAWRGVFRQLVATGLLEVDSD
AYGGLRLTDASRQVLKGERQIMMRREAPSRGRERGERSGSPRTGVPVQPQDLGLFNALRD
LRADLAKEQNVPAFVIFHDSTLRNIAEQRPTSLDELAHVGGIGGTKLVRYGQQLIDIVLQ
QG
NT seq 1809 nt   +upstreamnt  +downstreamnt
atgcaatcttccgctcattccgtgctcaaccgcgtgttcggctacgaccaattccgcggt
ccgcagcaggacatcgtcgaacacgtcgccgccgggcaggacgcgctggtgctgatgccc
accggcggcggcaagtccctgtgctaccagatcccctcgctgctgcgcgacggtaccggc
ctggtcatctcgccgctgatcgcgctgatgcaggatcaggtcgaggcgctgcgccagcta
ggcgtgcgcgccgaatacctcaattccacactggacgccgagaccgcgcagcgggtcgag
cgcgaactgctggccggcgagctggacctgctgtacgtcgctcccgaacgcctgctgacc
ccgcgcttcctgtcgctgctcgaacgcagccgcatcgccctgttcgcgatcgacgaggcg
cactgcgtgtcgcaatggggccacgatttccgccccgagtaccggcagctcaccgtactg
cacgagcgctggccgcagatcccgcgcatcgccctgaccgccaccgccgatccgccgacc
cagcgcgagatcgccgagcgcctggacctgacccaggcgcgccacttcgtcagctccttc
gaccgccccaacatccgctacaccgtggtgcagaaggagaacagcaagcgccagctgctg
gatttcctgcgcgcgcaccgcggcagcgccggcatcgtctactgcatgtcgcggcgcaag
gtcgaagagacggccgaattcctggccaaggaagggctcaacgcactgccctaccacgcc
ggcctgccggccgaggtgcgcgccggcaaccagcgccgcttcctgcgcgaagacggcatc
gtgatgtgcgccaccatcgccttcggcatgggcatcgacaagccggacgtgcgcttcgtc
gcgcataccgacctgcccaagtcgctggaaggctactaccaggaaaccggccgcgccggg
cgcgacggcgaagccgccgaggcctggctgtgctacggcctgggcgacgtggtgctgctc
aagcagatgatcgaaaagggcgaagccggcgaagaccgcaagcgggtcgagcggcgcaag
ctcgaccagctgctcggctattgcgaatcgatgcagtgccggcgccaggtgctgctggcc
ggcttcggcgagacctatccgcagccctgcggcaactgcgacaactgcctgaccccggcc
gcggcctgggacgccaccgtggccgtgcagaaggcactgagctgcgtctaccgcagcggc
cagcgcttcggcgtcggccacctgatcgacatcctgcgcggcagcgacggcgagaagatc
aagcagttcggccacgaccggctcagcacctacggcatcggcaaggacctggacgcgcgc
gcctggcgcggcgtgtttcggcaactggtcgccaccgggctgctggaagtggacagcgac
gcctacggcgggctgcgcctgaccgacgccagccgccaggtgctcaagggcgaacgccag
atcatgatgcgccgcgaggcgccgagccgcggccgcgaacgcggcgagcgcagcggcagc
ccgcgcaccggcgtcccggtgcaaccgcaggacctgggcctgttcaacgcgctgcgcgac
ctgcgcgccgacctggccaaggagcagaacgtgccggcgttcgtgatcttccacgacagc
accctgcgcaatatcgccgaacagcgcccgaccagcctggacgagctggcccatgtcggc
ggcatcggcggcaccaaactggtccgctacggccagcagctgatcgatatcgtcctgcag
caaggctag

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