KEGG   Xenopus tropicalis (tropical clawed frog): 100037836
Entry
100037836         CDS       T01011                                 
Symbol
cep78
Name
(RefSeq) centrosomal protein of 78 kDa
  KO
K16765  centrosomal protein CEP78
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xtr03036]
    100037836 (cep78)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:xtr03037]
    100037836 (cep78)
Chromosome and associated proteins [BR:xtr03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centriole associated proteins
    100037836 (cep78)
Cilium and associated proteins [BR:xtr03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   100037836 (cep78)
SSDB
Motif
Pfam: LRR_6
Other DBs
NCBI-GeneID: 100037836
NCBI-ProteinID: NP_001090753
Xenbase: XB-GENE-5884411
UniProt: A2RRS8
Position
1:132554632..132581664
AA seq 727 aa
MIDSVRIRHQGSMDFLSHYEYLCALQDSVPIPAVKANIRHGSLSFNADRIKLSDWLPILN
SLKINKSLLNVSIKSCHQPGLGEFGAEKYGIYFKRRIPPIRSKDMTFQVCKAITSCLSVS
GSLKELELHGLPLRERDLRILAKGLAASSSVESLSLAYCSCGDEGLEIICQSVKNSPTIK
TVNFTGCNLTWRGAEHIASIIKHQATRRHSEAWAESLRYRRPDLDCMAGLRRVTLNSNTL
VGDRGAIALAEVIGEDLWLKALDLRQCGISNEGAQAFLNAFQTNTTLIILDIRRNPLIDR
SLLKTIIERVLMNAHDTNSEYKWYTSPSSKDNGKVRQKWRSINNWNGRKGKNIVRVGFST
KKPMVIGRKYSSKELYCPDPRPPGAEGFLPWRTAERAKRHRDVSGEWASPGKADTAVKVI
MDSETSSESEKSDNILSILDQEYAVPGSGEKKSVKNYKCLQLEFENTRLRQINHTLSESL
HSRTATSVILEDEGVLDSIEKSFSKFHAFLDLLKDAGLGQLANLAGIDQSDFALPGDPQM
SSTIDKIAQQAPMPHQDQQETFFIHQAQSRDKKGEHTGPSESNALTADTLPSSREADKYC
TTSQKSKEGFDPDLKAREANVNSGRLPALENAQTYLYDKKGSRNECSASDSSRSQRSSLG
QKSKASASEKERKPSSKRSHSSGTNKASQESIAARDEKAAARSNASISESEIQEKMNSSE
SMHSGSH
NT seq 2184 nt   +upstreamnt  +downstreamnt
atgattgactcagtccgtatacgccatcagggttccatggatttcctttcacactatgaa
tatctgtgtgcacttcaggattctgttccaattccagctgtaaaagcaaacatccgacat
ggcagtcttagcttcaatgcagatcggataaaactctctgactggctgcctattctaaat
tctctgaaaataaataagagtttgctaaatgtgtcaataaaaagttgtcaccagcctgga
cttggggaatttggtgctgagaagtatggaatatatttcaaaaggcgcatcccccccatc
cgatcaaaggacatgacttttcaagtatgcaaagcaattacaagctgcttgagtgtatca
ggctctttaaaagagttagagctccatggactgcctctacgagagagagatttaagaatt
ttagcaaagggtttggctgcatcctcatctgtggaaagcctgtctttggcatattgctcc
tgtggagatgaaggactggaaattatttgtcaaagtgtaaagaattcacctacaatcaag
acagtaaatttcacagggtgcaatctgacatggcgaggagcagaacacatagcaagtatc
atcaagcatcaggctaccagaaggcacagtgaagcctgggctgaaagcctgagatacaga
aggcctgatcttgactgcatggctggtttaaggcgtgtcactcttaacagcaataccctt
gtgggtgaccgtggagccattgccttggcagaagtgataggcgaggacctctggttaaaa
gcactagatttgcgccagtgtggtatttccaatgaaggtgcacaagcatttcttaacgca
tttcaaacaaatacaacactgataatactggacatcagaagaaacccgctaatagaccgt
tccttactgaagaccattattgagagagtgttaatgaatgcacatgataccaattcagag
tacaaatggtacacatctccgtcttctaaggacaatgggaaagtaaggcaaaaatggaga
tctataaacaactggaatggacggaaaggaaaaaatattgtccgtgttgggttttcaact
aaaaagccaatggtcattggaagaaagtattcctcaaaagaattgtactgtcccgatcca
aggcctccaggagctgagggatttctgccttggcgtacagcagaaagagcaaaaagacac
agggacgtttcaggagaatgggcctctccaggaaaggcagatactgcagtgaaagtgatt
atggatagtgaaacctcttcagaaagtgaaaaatctgacaatattttgagtatccttgat
caagaatatgccgtgcctggatctggtgaaaaaaagagtgtaaaaaattacaaatgtctc
cagctggagtttgaaaacactcgactaaggcaaataaatcatactctttctgagtctctt
cactcgaggacagctacctctgtgatcttggaggatgaaggtgtccttgacagcattgaa
aagtccttcagcaagttccatgcgtttctggatcttctaaaagatgcaggcctggggcag
cttgcaaaccttgcaggcattgaccagtcagactttgctctgccaggggatcctcagatg
tcttctactattgataaaatagcccagcaggcaccaatgccacatcaagatcagcaagaa
acattctttatccatcaggcacaaagcagagataagaaaggtgagcatacaggcccatca
gaatccaatgctttgactgctgatacactcccttcttcccgagaggcagataaatattgt
accaccagccagaagagcaaagaaggttttgatcctgatctaaaggccagagaggcaaac
gtgaacagtgggaggcttcctgctctggagaatgcacaaacttacttgtatgataaaaaa
ggatctagaaatgaatgttctgcctcagattccagcaggagccaaagaagtagcttaggt
cagaagtccaaagcatcggcaagtgaaaaggagagaaagccatcttcaaaaagaagccat
tcctctgggacaaacaaagctagtcaagagtccatagcagctagggatgaaaaggctgcg
gcccgttctaacgccagtatatcagaatctgaaatacaggagaaaatgaattcttctgaa
agcatgcacagtggctcacattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (8)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (10)   
   RefSeq(nuc) (6)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (28)   

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