KEGG   Xenopus tropicalis (tropical clawed frog): 100038212
Entry
100038212         CDS       T01011                                 
Symbol
pax1
Name
(RefSeq) paired box protein Pax-1
  KO
K09382  paired box protein 1/9
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xtr03000]
    100038212 (pax1)
Transcription factors [BR:xtr03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain Paired-related
    100038212 (pax1)
SSDB
Motif
Pfam: PAX HTH_23 HTH_32 HTH_28 HTH_29
Other DBs
NCBI-GeneID: 100038212
NCBI-ProteinID: XP_002939483
Xenbase: XB-GENE-487951
UniProt: F6YT31
Position
5:complement(36054067..36065662)
AA seq 357 aa
MEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARY
NETGSILPGAIGGSKPRVTTPNVVKHIREYKQSDPGIFAWEIRDRLLADNVCDKYNVPSV
SSISRILRNKIGNLSQPSQYDSPKQPASQPTYNHLYQYPYPNPISPGSTKVGSHHPGVHM
PTGHVSIARQWPSAHSVNNILGIRTFMEQSPIAGTEGSVYSPKMEDWASVNRSGFPGSQN
MNGLEKSVVEPDMKYPQSASGLSTVGSFVPGCVYPTTNQYGVYGGPGAGYVTPGHHWQTQ
GNPLGPSVTVHGGDIAAPVTFKHPVREVVNRKPNSPIIKIPETLSNIHGLPIPASSS
NT seq 1074 nt   +upstreamnt  +downstreamnt
atggaacaaacctacggcgaagtcaaccagctgggaggcgtgtttgtcaatggaagaccc
ctgcccaacgctatcaggctgcggatcgtggagctggcccagctgggcatcaggccgtgt
gatattagccggcaattgcgagtctctcatggatgtgtcagtaagatcctggcgaggtac
aacgagaccggctccatcttgcccggggcaattgggggcagcaagcccagagtcaccacc
cctaacgtggtgaagcacatcagggagtacaaacagagcgacccgggcatcttcgcttgg
gaaatcagagacagacttctggctgataatgtgtgcgacaagtacaatgtgccctctgtc
agctccatcagtaggatattaaggaataaaattggaaacctctctcagcccagtcagtat
gacagccccaagcaacccgcatcccaaccaacgtacaatcacctgtatcagtacccctac
cccaaccccatctctcctggctctaccaaggtgggcagccatcacccaggggtgcatatg
cctacgggacatgtcagcattgccaggcagtggccttcggctcattctgtcaacaacatt
ctgggaatccgcaccttcatggaacaaagccctattgccggcacagagggctctgtctat
tctccaaaaatggaagactgggccagtgtcaaccgatcgggctttcctggcagccagaat
atgaacggcctagagaaatctgtggtggagcctgatatgaaatacccgcagtccgcctca
ggtctctctacagtgggcagctttgtcccaggatgtgtgtaccctaccaccaaccagtat
ggggtgtatgggggcccaggagctgggtacgttaccccagggcaccactggcagacacaa
ggaaacccccttgggcccagcgtgacggtacatggaggagacattgcagccccagtgaca
ttcaaacacccagtgagggaagttgtgaacaggaaacccaacagccctatcataaaaatc
ccagagaccttgagtaatatacatggacttccaatccctgcttcatcctcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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