KEGG   Xenopus tropicalis (tropical clawed frog): 100038256
Entry
100038256         CDS       T01011                                 
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
  KO
K13103  tuftelin-interacting protein 11
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xtr03041]
    100038256 (tfip11)
Spliceosome [BR:xtr03041]
 Complex C
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-SnRNP related factors
    100038256 (tfip11)
  Other components
   Complex C specific factors
    100038256 (tfip11)
SSDB
Motif
Pfam: GCFC TIP_N G-patch G-patch_2
Other DBs
NCBI-GeneID: 100038256
NCBI-ProteinID: NP_001090845
Xenbase: XB-GENE-984521
UniProt: Q0IIX9
Position
4:15109205..15119844
AA seq 825 aa
MSMSHLYGKDEDSDGVEMENFEITDWDLQNEFNPNRRKHFQTKEEATYGMWAERDSDDER
PSFGGKRSRDYSAPVNFISAGIRKPAAEEKSDSDSDSETQARRETFPKDFEAKKLRTGGN
FKPSQRTFAGGIKSNTDFGSWERHTKGIGQKLLQKMGYVQGRGLGKNAQGIIAPIEAKQR
KGKGAVGAYGSERTKQSIKDFPVVDSEEEEEKEFQKEMSQWRKDPGGGKKKPKYSYKTVE
ELKAKGKVGKSLSAPQKEISQVKVIDMTGREQKVYYSYSQLAHKHNIPGEAPGQGAKEEK
PQGFALPELEHNLQLLIDMTEQEIIQNDRQLQYEQDMVVNLTHELEKLSEVLEREEQAIQ
NLSKVLETVEECERRIQPMCDNPLTLEECARIFEMLQDKYYEEYKMSEKADLSVAIVYPL
MKDYFKDWNPLRDPTYGTDVMSKWKNLLEEGHLLSHSAHDASMDPYHRLLWETWVPLLRS
IIAQWQPRNCAPMVDFLDCWVHLLPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHSW
IHPWLPLMQSRLEPLFSPIRNKLANALQKWHPSDSSAKLILQPWKEVFTPGSWEAFMVKN
ILPKLGMCLSEFVINPHQQHMEVFHWVTDWEGMVSLSSIVGILEKHFFPKWLQVLCSWLS
NTPNYEEITKWYLGWKSMFSDLVLAHPAIKDKFNEALDIMNRAVSSSVGAYMQPGARESI
AYLTQTERRKDFQYEAMQERRDAESIAQRGIGAAAAVPMNFKDLIQSKAEEHNIVFMPLI
GKRHEGKQLYNFNRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq 2478 nt   +upstreamnt  +downstreamnt
atgtctatgtcgcacctttatggcaaagatgaggacagcgatggagtggaaatggagaac
tttgagatcacggactgggacctacagaatgagtttaaccccaaccgcagaaagcatttc
caaacaaaagaggaggcgacctatgggatgtgggcagagcgggactctgatgatgagagg
ccaagctttggggggaaaaggtctcgagactactcggcccctgtcaattttatcagcgct
gggatccgtaagccagctgcagaagaaaaatctgatagtgattccgacagtgaaacgcaa
gcaaggagggaaactttcccaaaggattttgaggcaaagaagctaaggacgggtggtaat
ttcaaaccatcacagaggacatttgctggaggaataaagtcaaacacagattttggttct
tgggagcggcataccaagggaatcggccagaaacttcttcagaagatgggttatgtgcaa
ggaagaggcctaggaaagaatgctcaaggtatcattgcccccattgaagccaaacaaagg
aaaggtaaaggagcagtaggggcgtatggctcagaaaggaccaagcaatcgattaaggat
ttccctgttgtggattctgaagaagaagaggaaaaggaatttcagaaggagatgagccaa
tggcgtaaggaccctggcggagggaagaaaaaacctaaatactcatacaaaacagtagag
gagctgaaagccaaaggcaaagtgggaaagtctctgtctgcaccccaaaaagaaatatcc
caagtaaaggtgattgatatgactggtcgggagcagaaggtgtactatagttacagtcag
cttgcccacaagcacaacatcccgggagaggcgcctggtcagggggcaaaggaggagaaa
cctcagggctttgctttgccagagctggaacacaacttacagctgctaattgatatgaca
gagcaagaaatcattcagaatgaccgtcagctgcagtacgaacaggacatggtggtgaat
ctcacccatgagctggagaagctttcggaggtgctggaacgggaggaacaagccatacag
aacctaagtaaggttctagagactgtagaggagtgcgaacggaggatccagcctatgtgt
gataaccctctgacgctggaggagtgtgcgcgcatattcgagatgttgcaagacaagtac
tatgaggagtacaagatgtctgagaaggcagacctttctgtggccattgtctacccactg
atgaaagattatttcaaagactggaacccacttagggatcctacttatgggactgatgtc
atgagtaagtggaagaaccttctagaggaaggtcacctcctatctcacagtgcacatgat
gcatctatggacccataccacagattgctgtgggagacgtgggttcccctgttaaggagt
atcattgcccaatggcagcccagaaactgcgctcccatggtggactttttagactgctgg
gtccatttgctgccagtctggatcctggataacatactagatcagcttattttccccaaa
ttacaaaaagaggttgagaactggaaccccctgacagacaccgtcccaatccactcgtgg
attcacccctggcttcctttgatgcagtcgcggctagagccactcttctctcccattcgg
aataaacttgccaacgccctccagaaatggcaccccagcgattcctctgccaagctgatc
ctgcagccctggaaggaggtgtttacgccaggctcttgggaagccttcatggtgaagaac
attttgccaaagctaggcatgtgtctcagtgagtttgttattaatccgcaccaacagcac
atggaagtcttccactgggtcactgactgggaggggatggtctctttgtccagcatcgta
gggatcctggagaaacatttcttccccaagtggctgcaggttctgtgctcctggctcagt
aatacccccaattatgaagagatcaccaagtggtatctcggctggaagtccatgttctca
gacctggtgttggctcacccggccatcaaggacaaatttaatgaggctctggatatcatg
aaccgagctgtgtcctctagtgttggtgcctacatgcagccgggggcacgggagagcatc
gcctacctcacgcagaccgagagaaggaaggacttccagtacgaggctatgcaggagcgg
cgagacgcggagagcattgctcagagaggaataggggctgcagcggctgtgcccatgaac
ttcaaggacctgatccagtccaaggccgaggagcacaacatcgtatttatgcctctaatt
ggcaagcgtcacgaggggaaacaactttacaacttcaaccgcatagtgatctatatagac
agaggcgttgtgttcgtacagggagagaaaacatgggtgcccacctccctgcagagcctt
attgacatggccaagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (26)   

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