KEGG   Xenopus tropicalis (tropical clawed frog): 100145555
Entry
100145555         CDS       T01011                                 
Symbol
rag1
Name
(RefSeq) V(D)J recombination-activating protein 1
  KO
K10628  V(D)J recombination-activating protein 1 [EC:2.3.2.27]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04068  FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    100145555 (rag1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xtr04121]
    100145555 (rag1)
Enzymes [BR:xtr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100145555 (rag1)
Ubiquitin system [BR:xtr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100145555 (rag1)
SSDB
Motif
Pfam: RAG1 RAG1_imp_bd zf-RAG1 zf-C3HC4 zf-C3HC4_2 zf-RING_6 zf-RING_10 zf-RING_UBOX
Other DBs
NCBI-GeneID: 100145555
NCBI-ProteinID: XP_002937338
Xenbase: XB-GENE-6087118
UniProt: A0A8J0QTA5
Position
4:complement(10683424..10694913)
AA seq 1126 aa
MRPRCTQGGPERGRGTVGPTGPFVLAAGDKEQCCAIWHFIINRGSFTPERQTRWELIIQS
WESVRLLSLSSDSLTAGPGKMEVALPNVPTEIHRPFTKFSEWKFKLFRVKSLERRPSEEE
TEGSEVSYSSSQETSPESTVVLEDLSLGSTPQSPSNFKPQEASEKSNEVDNNETDLKSLG
EETHITAIQQLCRICGASFKMDQQNRSYPVHGPVDSETQDVLRRREKKVTSWPELILKVF
KTDVRADVDTIHPTRFCHNCWTIMNQKFSHNSSEVYFPHNQAVEWTPHSATCHVCHSSKP
WGKRKGAPQLNPHKMKRRKMGSEFAKKSKASSNHSIQRNSSKALNQMKDSCKKIHLDTNL
LVVDYPSDFVKSMSCQVCEHILSDPVQTSCKHLFCRICILKYIKLMGCYCPSCKYPCFPT
DLTVPVKSYFNVLNALLLKCTVSGCDEEIPLGKYSHHISKHKETKGKEAYAHINKGGRPR
QHLLTLTRRAQKHRLRELKMQVKAFADKEEEGDVKSVCLTLFLLALRARNEHRQADELEA
IMEGRGAGLHPAVCLAIRVNTFLSCSQYHKMYRTVKATTGRQIFQPLHALRNAEKALLPG
YHSFEWRPPLKNVSTRTDVGIIDGLSGLNRSVDEYPVDTISKRFRYDAALVSALKDMEED
ILEGLKTQGLDDYMSGPFTVVVKESCDGMGDVSEKHGSGPAVPEKAVRFSFTVMNISVAN
NSGQVRIFEETKPNSELCCKPLCLMLADESDHETLTAILCPLIAEREAMKTAELLLEIGG
ILRSFKFMFRGTGYDEKLVREVEGLEASGSIYICTLCDSTRLEASQNLVNHSITRSHGEN
LQRYETWRSNPHHESVDELRDRVKGVSAKPFIETLPSIDALHCDIGNAAEFYRIFQLEIG
EFYKNFSATKEEKKRWQATLDKHLRKRMNLKPIMRMNGNFARKLMSKETVEAVCELVPCE
ERQTALTELMDLYLKMKPVWRSSCPAKECPELLCQYSFHSQRFAELLSTKFKYRYEGKIT
NYFHKTLAHVPEIIERDGSIGAWASEGNESGNKLFRRFRKMNARQSKVYEMEDVLKHHWL
YTSKHLQKFMNAHINLKNQGFTVNLDNPDQMERLESSMESLESVEF
NT seq 3381 nt   +upstreamnt  +downstreamnt
atgcgtcccaggtgcacccaagggggcccagagagggggcggggcactgtgggccccact
gggccatttgtattggctgctggggacaaggagcagtgctgcgccatttggcactttatt
ataaatagggggtcatttactcctgagagacagacaaggtgggagcttattatccagagc
tgggaatcagtgagactgttgagcctgagcagtgacagcctgacagcaggtcctgggaaa
atggaggtggcattgcctaatgtgccaaccgaaatacaccgtccatttactaaattctca
gaatggaagttcaaactgtttcgagtgaaatccttagagaggagaccatctgaggaggaa
acagaggggagtgaggtctcatacagcagctctcaagagacatcccctgagtctactgtg
gttttggaggatcttagtttggggtctacaccacagtcaccctcaaacttcaaaccacag
gaagcaagcgagaaatcaaatgaggttgacaacaatgagacagacctaaaaagtctggga
gaagagacccacattaccgccatacagcaactttgccgcatatgcggcgcctcttttaaa
atggatcagcagaaccggagctatcccgtccatggaccggtggacagcgaaactcaggat
gtcctaagaagaagagaaaagaaagtcacctcttggcctgagctcatcttaaaggtcttc
aagaccgacgtgagagctgatgtagataccattcatcccactcgcttttgccacaattgc
tggactataatgaatcagaagttcagccacaattccagtgaagtgtattttccccataac
caagctgtggagtggacgcctcactcagccacctgtcatgtgtgccactcatccaaaccc
tggggcaagagaaagggtgcaccccagctgaacccacacaagatgaaaaggcgcaaaatg
gggtccgaatttgccaaaaagtccaaggcctcctcgaaccactcaatccagcggaacagc
agtaaagctttgaaccagatgaaggacagctgcaagaaaatccatcttgacaccaatctc
ctggtggtggactatccatcggactttgtaaagtcaatgtcttgccaagtgtgtgagcac
attctgtctgatccagtgcaaacctcatgcaaacatctcttctgtaggatttgcatcctg
aaatacataaagctcatggggtgctactgcccatcatgtaagtacccatgcttccctaca
gacctcacagtgccagttaaatcctactttaatgtcctgaatgccttgttgctgaaatgc
actgtgtctggctgtgacgaggagatccctctagggaaatattctcaccatatctccaag
cataaagaaaccaagggaaaggaggcgtatgcccacattaacaagggcggcagacccagg
caacaccttctcaccttaacacggagagcacaaaaacatcgtctcagggagcttaagatg
caagttaaagcttttgctgataaagaagaagaaggtgatgtgaaatcagtgtgtttgaca
ctttttcttctggctcttagagcacggaatgagcacaggcaagccgatgaactggaagcc
atcatggaaggaagaggagcaggacttcacccggctgtctgccttgccataagagtcaac
acttttctcagctgcagtcagtaccataagatgtaccgaactgttaaagccacgactggg
agacagatctttcagcctctacatgctctcaggaacgcagagaaggcccttctaccaggt
tatcatagctttgagtggagaccacctctaaagaacgtttctaccagaacagatgttgga
attattgatggactctcagggctgaaccgatcagtggacgagtacccggtggatacaatc
tccaagaggtttaggtacgatgcagcccttgtctctgctttgaaagacatggaggaagat
atccttgaaggcttaaagacacaaggcctagatgactacatgagcggtcctttcacagtg
gtggttaaagagtcctgtgatgggatgggagatgtgagtgagaaacatggcagtggccca
gcagttccggagaaggccgtgcgtttctctttcactgttatgaatatcagcgttgccaac
aacagtggccaagttaggattttcgaagagacaaagccaaattctgaactgtgttgcaag
cctctctgcctgatgctagcagatgaatctgaccacgagaccctaacagccatattgtgt
cctctcattgccgaaagggaggctatgaaaacggctgaactgttgctggaaattggaggt
attctcaggagtttcaaatttatgttccgcggcactgggtatgatgagaagctggtgcga
gaggtagaaggacttgaggcctcgggctctatctatatctgtacattatgcgattccacc
cgtctagaagcttcccagaacttggtgaaccattccataaccaggagccacggtgagaat
ttacagcgctacgagacgtggaggagcaatccgcaccacgaatcagtagatgagttacgt
gatagggtcaaaggtgtctctgccaagccctttattgaaaccctgccgtccattgatgct
ctacactgtgacattggaaacgcagccgaattttacagaatatttcagcttgaaataggc
gagttctataaaaacttcagcgccaccaaagaagagaaaaagaggtggcaggccactctt
gacaagcacctcaggaagaggatgaacctgaagcccattatgagaatgaatgggaatttt
gccagaaaactcatgagcaaagagacagtggaggcagtgtgtgaactggttccctgtgag
gaacggcaaaccgcactgacagaacttatggacttatatctcaaaatgaaaccagtttgg
cgctcttcttgccctgccaaagagtgcccagaactgctttgccaatacagctttcactct
cagcgttttgcggagctcctgtccaccaagttcaagtacagatacgagggtaaaatcacc
aattattttcacaaaaccctggcacacgtgccagaaatcatagagcgcgatggctcaatt
ggcgcctgggccagcgaaggcaacgaatctgggaacaagctatttaggcgcttccgaaag
atgaatgccaggcagtcgaaggtctacgaaatggaagatgttctgaaacaccactggctg
tatacatccaaacacctccagaaatttatgaatgcacatattaatctgaaaaaccaaggg
ttcactgtaaatctagacaatcctgaccaaatggaaaggttagaaagttctatggaatct
ttagaatcagtggaattctga

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