KEGG T01011: 100145633

Xenopus tropicalis (western clawed frog): 100145633

Entry

100145633 CDS T01011

Gene name

pom121

Definition

POM121 membrane glycoprotein

Orthology

K14316

nuclear pore complex protein Nup121

Organism

xtr Xenopus tropicalis (western clawed frog)

Pathway

xtr03013

RNA transport

Class

Genetic Information Processing; Translation; RNA transport [PATH:xtr03013]

SSDB

Motif

Pfam:

POM121

Other DBs

NCBI-GI:

351721748

NCBI-GeneID:

100145633

UniProt:

B1H3H6

Position

AA seq 1054 aa
MEGGCCWDLAKRIQPIALPLALSLVTCALAYIYNQLTVAGLLLASCWTYRSSGRRFLLWK
WLKSRKLVPGTKKLSRKTEWKLQSPSVSLLEGSPSPLPLNMGTYMGKQEFPGRGEVCGPR
AIKEKLSRPNPSVPTPTRRLSFRDPLSSSQRTYLCARRDYPLKQEIYNKPGSLPRVCLDG
QQQQKMQLTPRHFTRRTPVKISPQGLKTKFHFDTAPEPNILSPSRLDLEKVPYLPSVRHH
IDLETSVTHSHHLSEPEQYPTSPSRSKADTSVATFSSHHKEDPCATESVLKALRECLKRK
RIKDDDSEDTENKRRKEHGEESKLVVNGSFCGSSKMEASRASWRSQSSSMENLSQQSSIS
IQDILREVPSSKNSDGKLSPASSSSLENLSKRKIITVPGHNEITSSLSSSRYHLQKKKRS
MDTPRCETPDWPIKKMRKDRLETSMSPSQETMKTQISEAQRVEANPSPVQLHKPRGNLPW
KRHVHLICPEHPDEFYRLPPGPIPGYSVTQADYDAAKEAAQQRFLKLFQEPSAPSVPSAP
ETRVSLTSQTSNLPDKSFPAGNDKPNTSAANTTFTLFSSTSDAKSVTASSTTPLLFSTVT
TSGTSSLQSLGSGQTKSESQYPKNGLFQVLGKPEGSNNNQPMFNPVFGPSESVNPSPVTA
APGLSTTTATTLKPICEDPRSQQAQTSMFKPIFEAPSSQTAPSALTSPFVFSSSTSTTSS
SFLGTTGNSTVTGKQEKPNLAVTTCTSNAISSSSVPTFGITKADPVSQGGPTSQANTNFG
FIGSTSVPAISTAFGSTTSAFTATVGSTANNTFPRNTAPTGASSISGSEAQTSISTTNSF
PKFGVSVGQNVFSASNPFGSGTQSTTGTSIQSATNANFSFVGSTSASTQPTFGFSHNTSM
PFGSGTKSSNTSNSSGFSAVGSVFGSATVPPSSIVTPNKSSSIILGTPEKCETKNQLVTN
QIPLGQGLTPAPFQSIMPTQSFTSSSTPFAPSTPTANQSSTPSSFPSMTAGQNFTSPGNN
LSPAAGFFSHGTAPKTRTAVRHKLHPRRPHPRKK

NT seq 3165 nt +upstreamnt +downstreamnt
atggaagggggctgttgctgggatttggctaagcgaatacagcccattgcactgcctttg
gccttgtcccttgtaacctgcgctttggcatatatatataatcaacttacagtggccggc
ctccttctagccagctgctggacctacaggagctctgggaggcggttccttctgtggaag
tggctcaaaagccgaaaactagttccgggcaccaaaaagctgagcaggaaaactgagtgg
aagctgcagagtccttctgtatccctgctggagggaagcccgtctcccctgcctctcaac
atgggcacctacatgggcaagcaagagtttcctggcaggggagaggtgtgcgggcccaga
gccattaaggagaagctgagtagacccaatccatcggtgccaacccctaccaggcgtctg
tcattcagggatccactgtcttcatctcaacgaacctatttgtgtgctcgaagggattat
cctcttaaacaagaaatttataacaagccaggatctctcccaagggtttgtttagatgga
caacagcagcagaaaatgcaattgacacccagacacttcactaggaggactcctgtgaaa
atttccccgcagggtctgaaaaccaaatttcattttgacaccgctccagagccaaatatt
ttatcgccctctcgtcttgacttggagaaagtaccatatttgccttccgtccgccatcac
atagacctggaaaccagtgtgacgcattctcaccatctatcggaaccagagcagtatcca
acatccccctcaagatctaaagcagacacttctgtagcaactttctccagtcatcacaag
gaagatccatgcgctacggagtctgtacttaaagcccttagagagtgcttaaagagaaag
agaattaaagacgatgactctgaagatactgaaaacaagagaaggaaggaacatggggaa
gaaagtaagctggttgtgaatggttccttttgcggaagctctaaaatggaagccagccgg
gcaagttggaggtctcaatccagttctatggagaacctgtcccaacagtcatccatttca
attcaggacatcttaagagaggtaccctcttccaaaaacagtgacggcaaactctcacct
gcctcctcatccagtttggagaatttatcaaaacgaaagattatcacggtgcctggtcat
aatgaaatcactagctccttaagctccagcagatatcacctgcagaaaaagaagcgatct
atggatactcccagatgtgagacacccgattggccaataaaaaaaatgagaaaagaccga
ctggaaacttctatgtcaccttctcaagaaacaatgaaaacccaaatttctgaagcacag
agagtcgaggcaaacccttctccggtacagctgcataagcctaggggaaatttgccatgg
aaacgccatgtccacctcatttgcccagaacaccccgatgagttctacagattacctcct
ggaccaataccaggctacagcgtgacgcaggctgattatgatgcagccaaagaggcagca
cagcagaggtttcttaaactattccaggagccatctgcaccatctgttccttctgcccct
gagacacgggtatctctgacatcacagacctcaaatctccctgacaaatcttttccagct
ggaaatgataaaccaaacacttctgcagcaaacactacgtttacccttttttcaagtact
tctgatgcaaaatcagttactgcttccagtacaacacccttgcttttttctactgttact
acatctggaaccagcagccttcagtcactgggatcaggtcaaacaaaatcagagtctcag
tatccaaagaatggtctttttcaggttcttggcaagccagagggaagtaataacaatcag
cctatgtttaacccagtatttggaccttcagagagtgtaaatccttcccctgttactgca
gctcctggtctctcgacaaccacagcaaccacactcaaaccaatatgtgaggatccacgt
agccagcaagctcagacttctatgtttaaaccaatatttgaggctcccagtagccagaca
gctccgtcagctctaacctctccattcgtgtttagcagctccacctccactacctcatca
tcttttctcggtaccacaggaaatagcaccgttacaggcaagcaggaaaaaccaaacttg
gctgtaacaacctgcactagtaacgccattagttccagttcagtacccacatttggaatt
acaaaggctgatcctgtttctcaagggggacctacttcacaggcaaatacaaatttcggt
tttattggcagtacatcagtacctgctatatcaacagcatttggatccaccacatctgca
tttactgctacagttggtagcactgcaaataatacatttccgcgcaacactgccccgact
ggtgcttccagcatctctggaagtgaagcacaaactagcatatccacaactaactccttc
ccaaaatttggagtatccgtaggacaaaatgtgttttctgctagcaacccctttggaagc
ggtacccaatctacaacgggcaccagtatacaatctgcaacaaacgccaactttagtttt
gtcggcagcacttcagcatccactcagcctacgtttggtttttcacataacacatccatg
ccttttggcagtggtacaaaaagcagtaacacttctaactcaagtggtttcagtgctgtg
ggatctgtatttgggagtgcaactgtccctccatctagtattgttactccaaacaagagc
tcatccatcatcttaggaaccccagagaaatgcgaaactaaaaaccagttggtaacaaac
cagattccgttgggtcagggcttgactccagcaccgtttcaatctataatgccaacgcaa
agctttacaagctcgagtactccatttgcaccaagtacaccaacagcgaaccagagttcc
accccaagctcttttccatctatgactgcagggcaaaactttacaagtcctggcaacaac
ctcagtcctgctgctggctttttttcccatggtactgcacctaaaactagaacagcagtt
cgacataaactgcatccacgtcggccacatcctcgtaagaagtaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   UniGene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (19)   
   RefSeq(nuc) (1)   
   GenBank (9)   
   EMBL (9)   
Protein domain (1)   
   Pfam (1)   
All databases (30)   

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