KEGG T01011: 100170549

Xenopus tropicalis (western clawed frog): 100170549

Entry

100170549 CDS T01011

Definition

uncharacterized LOC100170549

Orthology

K06243

laminin, beta 2

Organism

xtr Xenopus tropicalis (western clawed frog)

Pathway

xtr04510	Focal adhesion
xtr04512	ECM-receptor interaction

Class

Environmental Information Processing; Signaling molecules and interaction; ECM-receptor interaction [PATH:xtr04512]
Cellular Processes; Cell communication; Focal adhesion [PATH:xtr04510]

SSDB

Motif

Pfam:

Laminin_EGF Laminin_N DUF3584 hEGF Laminin_II

Other DBs

NCBI-GI:

194332619

NCBI-GeneID:

100170549

UniProt:

B3DLV1

Position

AA seq 1853 aa
MELWEATGLQRTLWESIRAKKFLLIFYLVIGQILGSLAQEPDVLHHGCTEGGCYPATGNL
LIGRAQSLSATSTCGMEEAQEYCIVSHLQDSEKCFACDSRVPYQKESHRIENVIYLTEED
EEKTWWQSENGVESVSIRLDLEAEFHFTHLIMKFKTFRPAAMLIERSADYGRTWKVYRYF
SYNCTKMFPGVPIHALQQIDDIICDQRYSDIEPSSEGEVIYKVLDPAITVEDPYSAEIQE
LLQITNLRINFTKLHTLGDNLLDQRPEVLQKYYYSVYELVVRGSCFCYGHASECSPVEGI
EAGVEGMIHGRCVCKHHTKGLNCEQCQDFYHDLPWRPAEANDPHTCKRCNCNNHSRKCHF
DMAVYLATGKESGGVCDDCQHNTMGRNCELCKPFYYQDPRADIRADNACISCDCDPVGSL
DGGVCDSHTNVNLGMIAGQCRCKGNVKGERCDSCKESFYGLSMNDPVGCQPCSCDPRGII
TGNTPCDQISGDCYCKRFVTGRYCNQCLPEYWGLSNDITGCRPCDCDFGGAYNNKCSLGD
GQCDCRSNIIGRQCGDVQLGYFCMPLDYYTYEAENAKGLSPTDPQLPGSPKPEAQTDCLE
YFNGIQNGKKVRLRRQRRTARVLQQRASQRRARQLQQKPDTEVIRREHNSGHMVTWTGQG
FVRVRDGAGLLFQIDNVPYPMDYDIMIRYEPESAEDWEATVSVTSRILPMSPRCGNVLPS
EQMYKEKLPHTERYLVLPKPFCFESNNQYEISIRFQRWGAANRHPAAFILIDSLVLLPKI
YELPGFHGNDPVSVHHREEMERYMCLDSFKMATMPDLAEMCIKLLCSISAIIHDGALPCL
CDLQGSLSAVCDKIGGQCKCKPNVIGQRCDQCAPGTYGFGPYGCSKCDCHPQGSTSRLCN
PFTGQCPCQSNVAGRQCDQCLPGQWGYPHCRPCVCNGHSDECDSKTGACIRCRDSTTGRH
CEKCLDGYYGDPILGSGQQCRPCPCPGYPGSRNYHGSSCYADKDSHQIVCLCAPGYTGTR
CDRCSPGYFGNPEQEGGECRPCQCNNNIDPTDPESCDSHSGMCMKCLYNTDGAHCEECKA
GFYGSAMQRNCRRCTCNEQGTLQSHCTRDVCYCDRVTGHCPCRANVLGKSCDQCASNFWN
FGGDLGCEPCTCDPAHSLRQDCNVFTGQCHCQPGFGGRVCSHCQENYWGDPQIKCEVCDC
DAYGSETAQCDPLTGKCFCRKGFTGQRCDQCARGFQNNYPRCLPCHECFAQWDMIISQLR
DRLQGVQQKLLDFQEGAVAPEISHSQIKELDNKLRTIEELIKDGGADGMRMLEQMTKLVN
KISSEVAQLSFQLHTQEKQMNGTEAKDRWQRGKLDQLTLDITVVNETVYDLKVQIEAIVA
AGFNESYNSIVKSYLESTEAEKIANGSVYGPGSPVFQSQQTREETERLLKEKLDTYKRNM
TAQKSSLKELQKKVQGLNVSKINEKICGAPGDQECEDSPCGGANCRDEDGKRKCGGDDCN
GALPVSAKALSTAQNITLELENMANRLKDIAQKIQDIQGIAQDAKVQTEATLANAKESKR
RIEDSTEKLREFIKKIKDFLTEEGADPESIELVARQVLNISLPASPGDIEALVNKIKESI
GNLSCTDEILTNTSEILATAKNLHKEAVEAQAKAEAVSANISDAQALLQEAEAKAKSAEK
ALKKAKQSIKDVKSKVEQTMQTLTGVEQKEMDIMERIGNLSEKVDDLLDKTESNRQIASD
AKERANLVLNSTGELRKEMDDVQRKYDDLKEKVGGYNSSSGTALDRIEKIKEEAKALYDK
ANTAKKELAKLEAQFRANEANMTAKILTIEQLENQTTQLLNDIREKSNIYSTC

NT seq 5562 nt +upstreamnt +downstreamnt
atggagttgtgggaagccactgggttgcagaggactctctgggaatccatcagggcaaag
aagttcctgctcatcttctatttagttataggtcagatcctgggatccctcgctcaggag
ccagatgtgctacatcatggctgtacagagggaggctgctatcctgccacagggaacctt
ctcattggtcgcgcccaaagcctcagtgctacatccacctgtgggatggaagaggctcag
gagtactgcattgtcagccatcttcaggactcggagaaatgctttgcctgtgattcccgc
gtcccctaccaaaaggagagccaccgaattgaaaatgtcatttacttgacggaagaagat
gaagagaagacgtggtggcaatctgagaatggagtagaatcagtgagcattcgtctggat
ctagaagcagaattccactttactcatctcattatgaaatttaagacattccgccccgct
gccatgctgatagagagatctgctgattatgggcgtacatggaaggtgtatcgttatttc
tcatacaactgcaccaagatgttccctggggtccccattcatgcactccagcagattgat
gatatcatttgcgaccagcgctattcagatattgagccatccagtgaaggagaggtgatt
tataaagtacttgacccagccataacagtggaggatccatacagtgctgagattcaagaa
cttcttcagattaccaacctgaggataaatttcaccaaactgcacacgcttggagataac
ctgttggaccagaggccggaagttctccagaagtattattactcggtgtatgagttagtg
gtgagagggagttgcttctgttatggacatgcctcagaatgctctcctgtggaaggaatt
gaagcaggagtggaagggatgatccatggaagatgtgtatgtaagcatcacactaagggc
ctgaactgtgagcaatgccaggacttttaccatgatctcccatggagacccgcagaagcc
aatgaccctcacacctgcaaacggtgcaactgtaacaatcactctaggaagtgtcacttt
gatatggctgtgtacctggccactgggaaggagagtgggggtgtatgtgatgactgtcag
cacaacacaatgggacgcaactgcgagctctgcaagcccttctactaccaggacccccgg
gcagacatccgggcagacaacgcctgtatctcttgtgactgcgaccctgtagggtctctg
gacggtggcgtttgtgacagtcacaccaatgtcaacctaggcatgatcgcagggcagtgt
cgctgcaaagggaacgtcaagggggaacgttgtgacagctgcaaggagagtttctatggg
ctgagcatgaacgatcccgttgggtgccagccctgtagctgtgaccctcgtgggattatt
acagggaacaccccatgtgaccagattagcggtgattgttactgcaagcgctttgtgact
gggcgctactgtaaccaatgcctgcctgagtattggggtctcagtaatgatatcacggga
tgccgtccttgtgactgtgattttggaggagcctataacaacaagtgctccttgggagat
gggcagtgtgactgtcgctccaacatcattggtcgccagtgtggagatgtgcagctgggg
tacttctgcatgccactggactactacacgtatgaagccgagaatgccaaggggctctca
cctacagacccccagttacctggttcccccaaacctgaagctcagacagattgcttggag
tatttcaatggtatccagaatggcaagaaagtgaggttgagacgacagaggagaaccgcc
cgtgtcctgcagcagagggcttcccaacggcgtgcgcgccaactccagcagaagccagac
acagaggtaatccgacgggagcacaactcaggtcacatggtcacctggacaggtcaagga
ttcgttcgagtccgagatggagctggtctcttgttccagattgacaacgtcccttatcca
atggattatgacatcatgatccgttatgagccagagtctgccgaggactgggaagcgact
gtcagtgtgacatcacggatattacccatgagcccacgttgtggcaacgtattgccctct
gagcagatgtacaaggaaaagctgccacatacagagaggtacttggtcctcccgaaaccc
ttctgctttgaaagcaacaaccagtatgaaatcagcatccgattccagcgctggggagct
gccaaccgccaccccgccgccttcatactcattgactcgctggtccttctgcccaagatc
tatgagctccccggcttccatggaaatgaccctgtgtcagtgcatcatcgggaagagatg
gaacgatacatgtgcctggattccttcaagatggccaccatgcctgacctggcagaaatg
tgcatcaagcttctctgcagcatctctgccatcatccacgatggagctctgccctgcctg
tgtgacctgcagggttcccttagtgctgtctgtgacaagataggaggacagtgcaagtgt
aagcctaatgtgattggccagcgctgtgaccagtgcgctccagggacctatggatttggc
ccatatggatgcagcaaatgtgactgccaccctcaaggttccacctccaggttatgcaat
ccctttacagggcagtgcccgtgtcagagcaatgttgccggcagacagtgtgaccagtgc
ttgccaggccagtggggctaccctcactgtaggccgtgcgtatgtaatggccattctgat
gagtgtgactccaagactggggcctgcatcagatgcagagattccactaccgggcgccac
tgtgagaagtgtttggatggatattatggggaccccatactgggctctggtcaacaatgc
cggccatgtccttgcccggggtatcctggcagtcgcaattaccatggcagctcctgctat
gctgacaaggattcccaccaaattgtgtgcctctgtgcgcctggatatacagggactcgc
tgtgaccgctgctcccctggttactttgggaaccctgaacaggaaggcggggagtgccgg
ccgtgtcagtgcaacaacaacattgaccccactgaccctgagtcatgtgactctcatagc
gggatgtgcatgaagtgcctctacaacacagatggagctcactgcgaagagtgcaaagct
ggtttctatggcagcgccatgcaacgaaactgccgccgatgtacatgcaatgagcaaggc
accctgcagtcccactgcaccagagacgtctgctattgtgaccgggtgactgggcattgc
ccctgcagagccaatgtgctgggcaagagttgcgatcagtgtgcctctaacttctggaac
tttgggggggacctcggctgcgagccctgcacctgtgacccagcccactccctccgacag
gactgcaatgtgttcacaggacaatgtcactgccagcccggctttggggggagagtctgc
tcacactgccaagagaattactggggtgacccccaaattaaatgtgaagtatgtgactgc
gatgcatacgggtcagaaacggcgcagtgcgaccccctcaccggaaagtgtttctgtcgg
aaaggtttcacgggacagagatgtgatcagtgcgccaggggcttccagaacaattatccc
cggtgcctgccctgccacgagtgtttcgcccaatgggacatgatcatctctcagctccgg
gatcgactccagggcgtccaacagaaactgttagacttccaggagggagcagtagcccca
gagatcagtcacagtcagattaaagagttggataacaagctgaggaccattgaagagctc
attaaagatggaggtgctgacggaatgcgaatgttggagcaaatgaccaaactagttaac
aaaataagttctgaagtggctcagctctcatttcagctacacactcaggaaaagcaaatg
aacggcacggaggcgaaggaccgatggcagaggggaaagctggaccagctgacgttagat
attactgttgtgaatgagacagtgtatgatctgaaagtgcagatagaggccatagtagcg
gcaggattcaatgaatcatacaacagcatcgtgaagtcgtatttagaatccacggaggca
gagaagattgccaatggctctgtgtatggtccgggaagtcctgttttccagtcgcagcaa
acaagggaagaaactgagaggcttctcaaggagaaacttgacacatacaaaagaaacatg
actgctcagaagagctcattgaaggagctgcaaaagaaggtccagggactcaatgtttcc
aaaatcaatgagaagatctgcggggccccaggagaccaggaatgtgaggactcgccatgt
gggggagcaaactgtagagatgaagacgggaagagaaaatgtgggggcgacgactgtaat
ggagctctgccagtttctgcaaaggcccttagcacagcgcagaacattaccctggagctg
gagaacatggccaacaggctgaaagacattgctcaaaagatacaagatatccagggaatt
gctcaagatgccaaggtccagacagaagccacactggccaacgccaaagaatccaagcgc
cgtatagaggattcaacagagaagctacgggaatttattaagaagattaaagattttcta
actgaagagggtgctgatccagaaagcattgagttagtggctcgacaagtcttgaacatc
tctctgcccgccagtcctggcgacattgaggcactggtcaataagatcaaagaaagtatt
gggaacctcagctgcaccgatgagatcctgaccaacacctctgaaatcttggccactgcc
aagaacctgcacaaagaggccgtggaggcacaggccaaggccgaggctgtgagtgcaaat
atatctgatgcccaggcgctgctacaggaggcagaggccaaagccaaatctgcagagaaa
gctttaaagaaggccaagcagagcattaaagatgtgaaaagcaaagtggaacagaccatg
cagaccctgactggagttgaacagaaagagatggacattatggaacgaataggaaatctc
tctgagaaagttgacgacttgctggataagactgagtccaacaggcaaatagccagcgat
gcaaaagaaagagccaacttggtcctcaattccactggggagctgagaaaggaaatggac
gacgttcagaggaagtacgatgatctgaaagagaaggttggcggttacaacagctcgtct
ggcaccgccctggacaggatagagaagataaaggaggaggccaaagctctgtatgataaa
gcaaatacagccaagaaggagctcgcaaaactagaagcacaattcagggccaatgaagcg
aacatgacggccaagattcttacgatcgagcaactggagaatcagacaacgcaactgcta
aatgatatacgagagaagtccaatatatactccacctgctaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   UniGene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

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