KEGG T01011: 100216252

Xenopus tropicalis (western clawed frog): 100216252

Entry

100216252 CDS T01011

Gene name

ogdh, akgdh, e1k, ogdc

Definition

oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

xtr Xenopus tropicalis (western clawed frog)

Pathway

xtr00020	Citrate cycle (TCA cycle)
xtr00310	Lysine degradation
xtr00380	Tryptophan metabolism
xtr01100	Metabolic pathways

Module

xtr_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xtr_M00032	Lysine degradation, lysine => saccharopine => acetoacetyl-CoA

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:xtr00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:xtr00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:xtr00380]

SSDB

Motif

Pfam:

E1_dh Transket_pyr DUF4343

Other DBs

NCBI-GI:

NCBI-GeneID:

Xenbase:

UniProt:

Position

AA seq 1018 aa
MFNLRTCASKLRPLTASQTVRSLKHSRPAAPRTFQQFRCLSTPVAAEPFLSGTSSNYVEE
MYYAWLENPKSVHKSWDIFFRNANAGASPGAAYQSPPPLGSSLSTLTQAQSLVQAQPNID
KLVEDHLAVQSLIRAYQVRGHHIAKLDPLGISSVNFDGAPVIVGSPNMGFYGLQESDLDK
VFHLPTTTFIGGNEMALPLREIIRRLETAYCQHIGVEFMFINDLEQCQWIRQKFETPGIM
QFNNEEKRTLLARLVRSTRFEEFLHRKWSSEKRFGLEGCEGLIPALKTIIDKSSENGVDY
VIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDR
NITLSLVANPSHLEAADPVVQGKTKAEQFYCGDTEGKKVMSILLHGDAAFAGQGIVYETF
HLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVM
YVCNVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEPMFTQPLMYKQIRKQKTVLQKYAETL
ISQGVVNQPEYEEEISKYDKICEEAFARSKDEKILHIKHWLDSPWPGFFTLDGQPRSMSC
PSTGLSEEVLTHIGTVASSVPVEDFTIHGGLSRILKGRGEMVKNRSVDWALAEYMALGSL
LKEGIHIRLSGQDVERGTFSHRHHVLHDQNVDKRTCIPMNHLWPNQAPYTVCNSSLSEYG
VLGFELGFAMASPNALVLWEAQFGDFHNTAQCIIDQFVCPGQAKWVRQNGIVLLLPHGME
GMGPEHSSARPERFLQMCNDDPDVWPKVSEDIAVRQLYDCNWIVVNCSTPASFFHVIRRQ
ILLPFRKPLIVFTPKSLLRHPEARSSFDEMLPGTHFERIIPDAGPASQNPEQVKRLIFCT
GKVYYELNKERSSRGMDGDVAITRVEQLSPFPFDLVEKEVQKYPNAELIWCQEEHKNQGY
YDYVKPRIRTTIHRAKPVWYAGRDPAAAPATGNKKTHMTELRRFLDTAFNLDSFKGHS

NT seq 3057 nt +upstreamnt +downstreamnt
atgtttaacctaaggacttgtgcctctaaactccggcctttgacggcctcccagactgta
cgatcccttaaacacagcaggcctgcggcccccaggacgtttcagcagttcaggtgtctt
agtacacctgtggccgcagagccttttctaagtgggactagctccaactatgtggaggaa
atgtactatgcttggctagaaaaccctaagagtgtccacaagtcatgggacatctttttc
cgcaacgcaaatgctggcgcatcccctggtgcagcttaccagagcccgcctcctctcggc
agcagcttgtccacccttacccaggcccagtcgttggtgcaggcccaacctaatatagac
aagcttgtggaggatcatctcgctgtgcagtcgctcatccgtgcttatcaggtgaggggt
catcacattgcaaagcttgacccgcttggaattagttctgttaattttgatggggctccg
gtgatagtcggatctccaaatatgggcttttatgggctgcaggaatctgacctggataaa
gtcttccatctcccaaccactacattcatcggcggcaatgaaatggctctgcccctgaga
gagatcattcgaaggctggagactgcatactgccagcacatcggagtcgaattcatgttt
ataaatgatctggagcagtgtcagtggataaggcagaagtttgagaccccaggaatcatg
cagtttaacaatgaagagaaaaggaccctgcttgccaggctggttagatctactcggttt
gaagagtttctccatcgcaagtggtcgtctgagaagcgctttggtttggaggggtgcgag
ggcttgatccctgctctgaaaaccatcattgataaatctagtgagaatggggtggattat
gtcatcatggggatgccccacaggggccgactaaacgtactggccaatgtgattaggaaa
gagttggagcagattttctgtcagtttgattccaaactggaagctgcagatgagggctcc
ggagatgttaaataccacctgggaatgtatcacaggaggataaacagagtgactgacagg
aacatcaccttgtccttggtggccaacccctcccatctggaggcagcagatcctgtggtc
cagggaaagacgaaagctgagcagttctactgtggggacacggagggcaaaaaggtgatg
tccatcctgttgcatggtgatgctgcattcgcaggacagggcattgtgtatgagaccttc
caccttagtgaccttccctcctacactacacatggcactgtgcatgtggtggtgaacaat
cagattggtttcaccactgaccctcgaatggcccgctcctctccctacccaacggatgtg
gccagagtggtgaatgcccccatcttccatgtcaacgcagatgaccccgaagctgtgatg
tacgtgtgtaatgtggctgcagagtggcgaagcaccttccacaaggatgtcgtggtggat
ctggtgtgttaccgtaggaacggtcacaatgagatggatgagcccatgttcacccagccg
ctgatgtacaaacagattcggaagcagaagactgtactgcagaagtacgcagagacccta
atctctcagggagtggtcaaccagccggagtatgaggaagaaatttcaaaatatgacaaa
atttgtgaggaggcttttgcccgatctaaagatgaaaagatccttcatatcaagcactgg
ctggactccccctggcccggctttttcaccctggacggccagccccgcagcatgtcctgt
ccttctactgggctcagtgaggaggtcctgacgcacattgggactgtggccagctccgtg
ccagtggaggatttcacaatccatggaggtctcagccgtatactcaaaggtcgtggagag
atggtaaagaacaggagtgtggactgggctctggcagagtacatggcattaggttccttg
cttaaagaaggcattcacatccgactgagtgggcaggatgtagagagaggcaccttcagt
caccgccaccatgtcttgcatgaccaaaatgtggacaagaggacatgcatcccaatgaac
cacctgtggcctaaccaggctccttacactgtttgcaacagctcattgtctgaatatggt
gtgcttggttttgagctgggatttgccatggcgagcccaaatgccttggttttgtgggag
gcccagtttggagatttccacaacacggctcaatgtatcatcgaccagtttgtttgtcca
ggtcaagccaagtgggtgcggcagaatggaattgttttgctgctgccacatggtatggag
ggcatgggtccagaacattcctctgccagaccggaacgtttcttgcagatgtgtaacgat
gaccccgatgtgtggccgaaagtttctgaagacattgctgttcgccagctttacgactgc
aactggattgttgtcaactgctccactccggccagtttcttccatgtgatccgcaggcag
atcctgttgcccttccgcaaaccgctgattgtcttcactcccaagtccctcctgcgccac
cctgaagctaggtcaagttttgatgaaatgttgcctggcactcattttgagagaattatc
ccggatgctgggcctgcttcccagaaccctgagcaggtgaagcgcttgattttctgcaca
gggaaggtgtactatgaactcaataaagagcgctcaagtcgtggtatggatggggatgtg
gccatcactcgtgttgagcagttgtctccattcccgttcgaccttgtggagaaggaagtg
cagaaataccccaatgctgaactgatctggtgccaggaagagcacaagaaccagggttat
tacgactatgtgaaacccaggatacgcaccacaattcaccgtgctaaacctgtctggtat
gctgggcgcgaccctgccgccgctcctgccacgggcaacaagaaaacccacatgacagaa
ctcagacgtttccttgatactgcgttcaacctggattccttcaagggccactcttag

All links

Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   UniGene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (42)   

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