KEGG   Xenopus tropicalis (tropical clawed frog): 100485183
Entry
100485183         CDS       T01011                                 
Symbol
helq
Name
(RefSeq) helicase POLQ-like isoform X1
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xtr03400]
    100485183 (helq)
Enzymes [BR:xtr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     100485183 (helq)
DNA repair and recombination proteins [BR:xtr03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    100485183 (helq)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DUF4332 DNA_pol_lambd_f Cdd1 HAT1_C DUF2264_C
Other DBs
NCBI-GeneID: 100485183
NCBI-ProteinID: XP_002939628
Xenbase: XB-GENE-993428
UniProt: A0A6I8RQT8
Position
1:complement(85428685..85500648)
AA seq 1000 aa
MESRSLRIQRRKPVRKRVLPPGHSLLTPTKKRMNSREDDNIKCHESDEDLFGEYDSFAED
LDLLAQVDDLENQEKLEQCNTFPCSSSDQRPEDPNHNEDKIKHSTSGELSSLFQSGQTAR
SLRITNELKGKRKDFLDVIPCSQLPCNEDSNLRTGFPCVKANGAQDISRMDKRKSLKDHL
KSTLAVNAKVQTPRISRTKELKKAILLEEFDVAQQTVKTSCDLDLGPFYGLPSRVRDLIY
QFRRIKKLYDWQHTCLTLQSIKERKNLIYSLPTSGGKTLVAEILVLQELLCRQKDVLMIL
PYVAIVQEKVRGLASFGVELDFLVEEYAGSRGRFPPIKRRTKKSLYIATIEKGHSLINSL
IETGRINDLGLIVVDELHMLGEGSRGAILEMTLSKILYTSTSIQIIGMSATLNNVAELQN
FLKAEYYTNNFRPVELKEFVKVRDCIYEVDSNAENNLTFSRLLNYKYSNNMMKIDPDHVV
ALVTEVIPANSCLVFCPTKKNCENVAEMICKYLNKLYVEHREAEKKNLIADLKNIGNGVL
CSVLKRTIPFGIAYHHSGLTSDERKLIEEAYSAGVLCLLACTSTLAAGVNLPARRVILRA
PYVANDFLKRAQYKQMVGRAGRAGIDSAGESILIIQEKDKELVQELISKPMENCYSNLMH
NSGKDFQSLLLSLIGLKITKTAEEIYSFVSCTLFSVQQSVLCKAKNLLDVTKESLECLVD
KGLICGKTCSETEQYIFQVSKLGHATYKGCIDLACYDLLYSDLNRGLEGLVLESFLHLLY
LVIPYDLVGKFNPDWMIYFRQYNSLSPVEQKVAASVGIPESFLARKASGQTVKTSANNMV
VNRLYLSFILYTLLKETDIWRVSAKFSIPRGTLQNLLSSSASFSSSVLHFCEELDEFWAY
KSLLQELTKKLTYCVKSELIPLMEVAGVMEARAKQLYNAGYTSLAHLANADPEVMVKKIE
HLSRHQAKQIVFSAKMLVNEKAEALQEEVDELSRLPPDLP
NT seq 3003 nt   +upstreamnt  +downstreamnt
atggaaagtagaagtctccggatacagaggaggaagccagttcgaaagagagtcttgcca
ccaggccatagtctgctgactccaaccaaaaagagaatgaacagcagagaggatgacaac
ataaagtgccatgaaagtgatgaagacctctttggggaatatgacagctttgctgaggat
cttgacctactggctcaggtggatgacttagaaaaccaggaaaagctagagcaatgtaat
acctttccttgttccagttcagaccaaagacctgaggaccctaatcacaatgaagataaa
attaaacattctactagtggggagctgtcttcactattccagtcagggcagacagcccgc
tcattaagaatcacaaatgaattaaaaggtaaaaggaaagactttttagatgtcattcca
tgctctcagctgccctgcaatgaagattcaaacctacgtactggttttccttgtgttaaa
gcaaatggagcccaggacatttcaaggatggataaaaggaaaagcttaaaggaccacctc
aaaagcaccttggctgtaaatgcaaaggtacaaacaccaaggatatcaaggactaaggaa
ctcaaaaaagccattcttttagaggaatttgatgtagctcagcagactgtgaaaacctcg
tgtgatcttgacttgggaccattttatggcttacctagtagggttcgtgatctaatttat
cagtttagaagaattaaaaaactttatgactggcaacacacgtgcttgaccttacagtct
ataaaggaacggaaaaacttaatttattcactacctacaagcggtggaaaaacgcttgtt
gctgaaattctcgtccttcaagaacttctgtgcagacaaaaagatgtactcatgatttta
ccttatgttgccattgtacaggaaaaggttcgaggcttggccagttttggagttgagcta
gattttttggttgaggaatatgctggcagcagaggcaggtttcctcccattaaaaggaga
acaaaaaaatcgctgtacattgccacaattgaaaagggtcatagtcttattaactccctt
attgaaacaggacggatcaacgatttgggtctcattgtagttgatgagttgcacatgctt
ggtgaaggaagcagaggagctattttggaaatgactttgagcaaaattctctacaccagt
acaagtatacaaatcattggcatgagtgcaactttaaacaatgtagcagaactgcaaaat
tttctgaaggctgagtattacacaaataatttccgacctgttgaattaaaggaatttgtg
aaagttcgtgattgtatatatgaagttgacagcaatgcagaaaataacttaacattttca
cgtcttctcaactacaagtattcaaacaatatgatgaagatagatcctgatcatgttgtt
gccttggtgacggaggtgattccagccaattcttgtctcgttttttgccccacaaaaaag
aactgtgaaaatgttgcagaaatgatttgcaaatacttaaacaagttatatgtagaacac
agagaggcagaaaaaaaaaacttgattgcagatcttaagaatattgggaatggagttttg
tgctcggttttaaaaagaacaattccttttggcattgcttaccaccacagtgggctgact
agtgatgaacggaagctgatagaggaagcctattcagctggagttctttgcctccttgcc
tgcacctctacccttgcagcgggagttaatcttccagctagaagggttattttacgagca
ccttatgttgctaatgattttctgaagagagctcagtacaaacagatggttggtagagct
ggccgtgctggtattgatagtgccggggagagcatccttataatacaagaaaaagacaag
gaactggtgcaagaattaataagcaagccaatggagaactgctacagcaatctcatgcac
aactctggtaaagattttcaaagcctgctattgtctttaattggacttaagattacaaaa
acagcagaggaaatctacagctttgtttcctgtacattattcagtgttcagcagtctgta
ctttgcaaagcgaagaatctcttggatgtaacaaaagaatctctagaatgcttagttgac
aagggcctcatttgtggaaaaacgtgtagtgaaacagagcagtatatatttcaagtctca
aagctaggccatgcaacatacaaagggtgcattgatttggcttgctatgacttgctgtac
agcgacttaaataggggcctggaaggtcttgttctggagagttttcttcaccttctttac
cttgtgatcccatatgaccttgttggaaagtttaacccggactggatgatctacttcaga
cagtataactcactcagtcctgtagaacaaaaagtagcagcaagtgttgggattccagaa
agctttcttgcgcggaaggcttcaggtcaaactgtaaaaactagtgcaaataatatggtt
gtgaacaggctgtatctctccttcatactttacaccttactgaaagagactgatatttgg
cgtgtgtctgcaaaatttagcatcccgcgaggaactttacagaatcttttgagctcatct
gcttccttctcatcttctgtgcttcatttctgcgaggaattagatgaattctgggcatat
aaaagtctccttcaggaacttaccaaaaagcttacttactgtgtgaaatcagagctcatc
ccacttatggaggtggcaggtgttatggaggctcgagctaagcaactctacaatgctggc
tatactagtttagcacatttagccaatgctgatcccgaggtgatggtgaaaaaaattgaa
catctgtccagacatcaggctaagcagatagttttttcagccaagatgctcgtaaatgaa
aaggcagaagctcttcaagaagaagttgatgaactaagtcgtctaccaccagatctccca
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (11)   
   Pfam (11)   
All databases (34)   

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