KEGG T01011: 100485566

Xenopus tropicalis (western clawed frog): 100485566

Entry

100485566 CDS T01011

Gene name

lamb2

Definition

laminin, beta 2 (laminin S)

Orthology

K06243

laminin, beta 2

Organism

xtr Xenopus tropicalis (western clawed frog)

Pathway

xtr04510	Focal adhesion
xtr04512	ECM-receptor interaction

Class

Environmental Information Processing; Signaling molecules and interaction; ECM-receptor interaction [PATH:xtr04512]
Cellular Processes; Cell communication; Focal adhesion [PATH:xtr04510]

SSDB

Motif

Pfam:

Laminin_EGF Laminin_N APG6

Other DBs

NCBI-GI:

301607003

NCBI-GeneID:

100485566

Position

AA seq 1783 aa
MAPSLWPFGIVITALVTGSLSQIPDQQHGCSQGSCYPATGDLLVGRADKLKATSTCGLRR
AQPYCIVSHLQDEKKCFVCDSRKPYNPLYNPISHRIENVITTFAPHRKKAWWQSENGVSA
VTIQLDLEAEFHFTHLIMTFKTFRPAAMLVERSADFGRTWQAYRYFGHDCASSFPNVSRS
ALRKVDEVICESRYSDIEPSTEGEVIYRVLDPAIPIRDPYGPNIQNLLKITNLRINFTKL
HTLGDNLLDSRVEIKEKYYYALYELVVRGNCFCYGHASECAPIQGVSRDVEGMVHGRCVC
KHNTKGLNCEQCDSSFNDLPWRPAEGRSTNACKKCNCNNHSRKCHFDMAVYLSTGNVSGG
VCDDCVHNTMGRNCELCKPFFYKDPSKDLRDSAVCKACDCDPDGSLDGGLCDSLDNPALG
LIAGQCRCKDYVEGPRCDRCKTGFFGLSTNNFQGCQRCQCDPRGTISDGAQCDPISGDCF
CKRFVTGRTCNQCLPEFWALSHDLHGCRSCDCDIGGAWDNHCATETGQCRCRSHMVGRQC
NQVKSGYYRIHLDHYTYEAESALHRQGCSVLERERLIGRPATWTGPGFALVPEGGILEFQ
ISNIPYSMEYDVIIRYEPQLPATWEQVKISVIRPGPIPTSSPCGNTIPADDLMVASLPPG
TRHVVLPQPVCLERGVSYTIRLEFSRYSLREKIPSANILIDSLVLVPRYSSMEMFIAGDP
ASIQRKETFERYRCHSNSGNVIKSSTTEVCSGLITSMSAIIHEGALPCSCDPQGSLSSEC
DPNGGQCQCKANVIGQRCDRCAPGTHGFGPTGCKACECNMEGSTHNFCDQRTGQCPCRPG
AFGSRCDRCQPGHWGFPNCRQCQCNGHSEECDQRTGACLNCRDHSTGDRCERCTAGFYGN
PILGSGDHCRPCPCPEGPNSGRHYAASCHQDPRSRQVICNCKQGYTGPRCEECSPGFFGN
PFQTGGRCLLCQCNNNIDMTDIGGCDRRSGQCLKCKYNTEGRFCEHCRIGFYGDASRRNC
RKCTCNYLGTEPSQCPSREDCMCDRTSGQCLCLPNVRGQNCDRCSPHFWNLASGKGCQPC
NCDPNHSFSLSCNEFTGKCQCRPGFGGLTCTDCQENYWGNPNIQCRACDCDRRGIKAPQC
NRASGHCDCRAGVSGVRCDQCARGFSGQFPDCQPCHQCFGDWDRIVQDLATRTKSLVQRG
KDIQQSGVAGVYQKNFREIEKKLAKAQGIVNARNATAESVTKLMKIMDDLRNKINESTEA
LTQLEGELTAVQDENFDANHDLAELERDARSLNMTAKERSHQLDVLKNSNFLGAYDSIQQ
SHAKSRQAEKQANNATTNVPSPVSDSARTREKTQQLITHKRDDFNRKNAANRRALNDLAA
KTDTLDMKKINEKVCGAPGDAPCSESPCGGAGCRDDEGKRHCGGLNCNGAVATADNALGR
ARHAEEELQKALGEVEVLFQKVAEAKVKADRAKQRAQATLDRANETKARVEQSNKELREL
IQQIKDFLNQEGADPDSIEMVASRVLDLTIPATPKQIQRLAEEIKDRVKTLANVDAILDQ
TAADVRKAEQLLHEAKRAKNRAENVKNTAESVKRALDDARRAQNAAEGAIQSANDDIKDT
ERKLTAIQTATSSAENQLNDAMDRVGNLDKQIDGLKMKRANNSLAASRAEESATAALDKA
NDAKKILEGQLADKYKTVQNVVDRKAKNIKEAKTKADQLQDEAKKLLENAQDKLKRLQDL
EVEYTKNEKLLQDKAKRLNGLEDKMKEILHAINQQIQIYNTCQ

NT seq 5352 nt +upstreamnt +downstreamnt
atggcgccgtccttgtggccatttggcattgtgataactgccttggtcacaggatccctt
tcccagattcctgaccagcaacatggatgttctcaaggtagctgctaccctgccactgga
gacttgctggtgggccgagccgataagctcaaagctacatctacctgtggccttcggaga
gctcagccatactgtatagtcagccatttgcaggatgaaaagaaatgcttcgtctgcgac
tctcgcaagccctacaatcccctgtataaccccatcagccaccgcattgaaaacgttatt
acaacctttgctcctcatcgaaaaaaggcttggtggcagtctgaaaatggtgtttccgca
gtcactattcagctagatttggaggctgaatttcacttcacccacctgatcatgaccttc
aagaccttcaggccggcggccatgctggtggaacgctctgcagactttggccgtacctgg
caggcttaccgttactttggacacgactgtgcctcctccttcccaaacgtgtcccgcagt
gccctgaggaaggtggatgaagttatctgtgaatcccgttactctgacattgagccctct
acggaaggggaggtcatttacagagttttggatccagctatcccgatccgagacccatat
ggcccaaatattcagaatctcttgaagatcaccaacctcagaatcaactttaccaagctg
cacacattgggcgacaaccttctggattcccgagtggagatcaaagagaagtattactat
gccctttacgagctggtggtacgagggaactgcttctgttatggccatgcatctgaatgc
gcgcccatccaaggagtgtccagagatgtcgagggcatggtgcatggaagatgtgtgtgc
aaacacaataccaaggggctcaattgtgagcaatgtgatagttcctttaatgatcttcct
tggagaccagcagaaggacgcagcaccaacgcctgtaaaaagtgcaactgcaacaatcac
tctcgcaagtgtcactttgacatggccgtgtacttgtctactggaaatgtgagcggtggg
gtatgtgacgactgtgtgcacaacaccatgggccgtaactgtgaactgtgcaagccgttc
ttctacaaggatccaagcaaggatttacgggacagtgcagtctgcaaagcctgtgactgt
gacccagacgggtcgttggacggaggcctgtgtgactccctggataacccagctttgggt
ctcattgctggacagtgccgctgcaaagattatgtcgaaggcccaagatgtgatcgatgc
aagactggattctttggcctgagtacaaataactttcagggctgccaaaggtgccagtgt
gacccaagaggtaccatctcggacggtgctcagtgtgacccaatcagtggcgactgtttc
tgcaaacgctttgtgactggccgaacatgcaaccaatgcctgcctgaattttgggccctc
agccatgacctccatgggtgcagatcctgtgactgtgacattggcggtgcctgggataac
cactgtgctacggagacaggccagtgtcgatgccgcagccatatggttggcaggcaatgt
aaccaggtgaaatctggctactaccgcatacacctggatcactacacgtacgaggccgaa
tctgctttgcaccgacagggttgttcagtgttggagagggaacgtctgatcggtcgccca
gccacatggactggtcctggatttgccctggtcccagagggaggaattctagagttccag
atcagcaatattccttattctatggaatatgatgtcatcatacgttatgaaccccagctt
ccagcaacttgggaacaagtcaaaatatccgtgattagaccgggtcctatcccaacgagt
agcccatgtggtaataccatcccagctgatgatctgatggtggcatctctaccccctggc
acaaggcatgtagtcctgcctcagccggtttgtctggaacgtggggtcagttatactatt
cgactggagttcagcagatacagtttgagagaaaagatacctagtgccaacatattgatt
gattcgctagtgctggttcctagatactcctccatggaaatgttcattgccggagaccct
gcatctatacaacgcaaggagacttttgagcgttatcgctgccatagcaacagtggaaat
gtaataaagtcatctaccaccgaggtgtgctctggtctcatcacaagcatgtcggctata
attcatgaaggagcactgccctgtagctgtgacccacagggatctctgagctcagaatgt
gaccccaatggtgggcagtgccagtgtaaagctaatgtcattgggcagcgctgtgatcgc
tgtgcaccaggaacacatggatttggaccaacaggatgcaaagcctgtgaatgtaatatg
gagggatccactcacaatttctgtgatcagcgcaccggtcagtgtccttgtcggccaggg
gcatttggctccaggtgcgaccgctgccagcctggccactggggcttcccaaactgccgg
cagtgtcagtgcaatggtcattcagaagagtgcgaccagagaacaggggcatgtctgaac
tgccgagaccacagcaccggagacagatgtgagagatgcactgcaggcttttatggaaac
ccaattctgggctcaggggaccactgccgtccctgcccctgccctgaggggcccaacagt
gggcgacactatgcagcatcctgtcatcaagacccccgttccagacaagtcatctgcaac
tgcaaacaggggtacacggggcctcgctgtgaagaatgttctccagggttctttggaaat
ccattccagactgggggacgctgccttctttgccagtgtaataataacattgatatgaca
gatattgggggttgtgaccgccgcagtggccagtgcctcaaatgcaagtacaacaccgaa
gggaggttctgtgagcactgtcgaattggcttttatggggatgcatcaaggcgcaactgc
agaaaatgtacatgtaactaccttgggacagaaccaagccagtgtccatcacgggaagac
tgcatgtgtgacagaacaagcggacagtgcctttgcttaccaaacgtcaggggtcagaac
tgcgaccgttgcagtccacacttttggaacctggcaagcggcaagggctgtcagccatgt
aactgtgaccccaaccattccttcagcctatcctgcaatgagtttacaggaaaatgtcaa
tgccggcctggattcggtggcctgacctgtacggattgccaggaaaattattggggaaat
cccaatattcaatgcagggcttgtgattgtgatcgccgtggcatcaaggcaccacagtgt
aatagagcctcgggtcattgtgactgccgggctggagtgtcaggagtgcgttgtgaccag
tgtgcccggggattttctgggcagtttcctgattgccagccctgtcatcagtgttttggt
gactgggaccgtatagttcaagacctggccactcgtaccaagagcctagttcaaaggggc
aaggacatccagcagagtggggtagccggagtgtaccaaaagaacttccgtgagatcgag
aagaagcttgccaaggctcaaggcattgtcaatgcccgcaatgccactgcggaatcagtg
actaaactaatgaagattatggatgacttgcggaataaaattaacgagtcaacagaggct
ctcacgcagttagagggcgaactgacagctgtgcaggatgagaactttgatgccaaccat
gatctggccgagttggaaagggatgctaggagtttaaacatgactgccaaggagaggtcc
catcagctggatgtcttgaagaactcaaactttttgggtgcatatgacagcatccaacaa
tctcatgcaaagtcaagacaagccgaaaaacaagccaataatgccaccaccaatgttccc
agtcctgttagtgactcagctaggaccagggagaagacccagcagctgataacacacaag
cgggatgactttaataggaagaatgcagctaatcgtcgggcacttaatgatctggcagct
aaaacagacacccttgacatgaaaaagatcaatgagaaggtctgtggggctccaggagat
gccccatgctctgagagtccctgcggtggagctggttgtcgtgatgatgaagggaagagg
cactgtggtgggttgaactgtaatggagccgtggctactgctgacaatgctttgggacga
gcacgccatgctgaagaagaacttcagaaagcactaggagaagtagaagtgcttttccaa
aaggtggctgaagcaaaggtaaaggcagacagagcaaaacagagggcacaagccaccctc
gacagggcaaatgaaacaaaggcaagggtggaacagtccaataaggagctgcgggaactc
atccagcaaatcaaggactttctgaaccaggaaggtgcagacccagacagcattgagatg
gtggcaagtcgtgtcttggatctcacaatccctgcaaccccaaagcaaatccagcgtctt
gctgaggaaatcaaggacagagtgaaaacacttgcaaacgtggatgccattctggaccaa
accgctgctgatgtgcgcaaagcagagcaactgctgcatgaagccaaaagagccaagaac
cgagccgagaatgtaaagaacacagccgagtctgtgaaaagggccctggatgatgctagg
agagctcagaatgctgctgaaggagctatccaaagcgccaatgatgacatcaaagacacg
gagaggaaattaacagcaattcagacagcaacatctagtgcagagaatcagcttaatgat
gctatggatcgagtaggaaatctggataaacaaattgacggtctgaaaatgaaaagggcc
aacaacagcttggctgccagccgtgcagaagaatctgccactgcagcactggataaagca
aatgatgccaagaagatcttagaaggacaactggcagacaaatacaaaactgttcagaat
gttgttgatcgaaaagctaagaacattaaagaggcgaagacaaaagcggaccaacttcaa
gatgaggcaaagaaactcttagagaatgcacaggataaattaaagaggttgcaagatctg
gaagttgaatatacgaagaacgagaaacttcttcaggacaaagcgaaacgtcttaatggc
ctagaagacaagatgaaggaaattttacacgcaattaaccaacaaattcagatttataac
acctgccagtag

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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