KEGG T01011: 100487877

Xenopus tropicalis (western clawed frog): 100487877

Entry

100487877 CDS T01011

Definition

retinoic acid receptor RXR-alpha-like

Orthology

K08524

retinoid X receptor alpha

Organism

xtr Xenopus tropicalis (western clawed frog)

Pathway

xtr03320	PPAR signaling pathway
xtr04920	Adipocytokine signaling pathway

Class

Organismal Systems; Endocrine system; Adipocytokine signaling pathway [PATH:xtr04920]
Organismal Systems; Endocrine system; PPAR signaling pathway [PATH:xtr03320]

SSDB

Motif

Pfam:

Hormone_recep zf-C4 Nuc_recep-AF1

Other DBs

NCBI-GI:

301611491

NCBI-GeneID:

100487877

Position

AA seq 459 aa
MPLPWCGCDFSTQVNASSLNSSGLRGSMTAPLLHPSLGNSGINNSLGSPTQLHSPLNGMG
PPFSVISPPLGPSMPIPSTPGLGFGTGSPQIHSPMNSVSSTEDIKPPPGINGILKVPAHP
SGPMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDSKDCMIDKRQ
RNRCQYCRYQKCLAMGMKREAVQEERQRGKERNENEVESSSSANEDMPVEKILDAEHAVE
PKTETYIEANMGLAPNSPSDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRA
GWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMD
KTELGCLRAIVLFNPDSKGLSNPSEVEALREKVYASLEAYCKQKYPEQPGRFAKLLLRLP
ALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT

NT seq 1380 nt +upstreamnt +downstreamnt
atgccccttccttggtgcggctgcgatttttccacccaggtaaacgcctcgtccttaaac
tcctcgggcctccgcgggtctatgactgcccctctgctccatccgtccctcggcaactct
gggatcaacaactccctgggttcccccactcagctccactctcctctcaatggaatgggc
ccgcctttctccgttatcagcccgcccctggggccctccatgcccattccatccacgccc
ggcctcggctttggaacaggcagccctcagatccattcccccatgaactcggtcagcagc
acagaagacatcaagcctcctccgggaatcaacggcatccttaaagtaccggcccatccc
tcaggacctatggcctctttcaccaagcacatctgcgccatctgcggtgacagatcttca
ggcaaacattacggggtttacagctgcgagggctgcaaggggtttttcaagcggacggtg
cggaaggacctgacttacacctgccgggatagcaaggactgcatgattgacaagcgacag
cggaaccggtgccagtactgccggtaccagaaatgtctagcgatgggcatgaagagagaa
gccgtccaggaggagagacagagggggaaggaacgaaacgagaatgaggtggagagtagc
agcagtgccaacgaggacatgccggtggagaagatccttgatgcagagcacgcggtggaa
ccaaagactgagacatacatagaggcgaacatgggcctcgctcccaactctcccagtgac
cctgttaccaacatttgccaagcagcagacaagcaactcttcacactggttgaatgggca
aagagaatccctcatttctccgagctgcctctggacgaccaagttatcctacttagggca
gggtggaacgagctccttattgcctcattttcacatcgttcaatagctgtcaaagatgga
atcctcctcgccacgggccttcatgtacatcggaacagcgcacacagtgcaggagtcggt
gcaatttttgatagggtcctcacagaactggtatccaaaatgagagacatgcagatggac
aaaacagaactcggttgcttacgagccattgtcctcttcaacccagactcaaaaggtctc
tcgaacccctcagaggttgaggctctccgagagaaagtctatgcatcgttagaggcctac
tgcaaacagaaataccccgaacagcccgggaggtttgcgaaactcctcctacgcctgcca
gctctacgctccattggtctgaaatgcctggaacacctcttcttcttcaaactaatagga
gacacgcccatcgacactttcttaatggagatgctggaagcccctcaccaaatgacttaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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