KEGG T01011: 100492311

Xenopus tropicalis (western clawed frog): 100492311

Entry

100492311 CDS T01011

Definition

clathrin heavy chain 1-like

Orthology

K04646

clathrin heavy chain

Organism

xtr Xenopus tropicalis (western clawed frog)

Pathway

xtr04142	Lysosome
xtr04144	Endocytosis

Class

Cellular Processes; Transport and catabolism; Endocytosis [PATH:xtr04144]
Cellular Processes; Transport and catabolism; Lysosome [PATH:xtr04142]

SSDB

Motif

Pfam:

Clathrin Clathrin_propel Clathrin_H_link Clathrin-link Coatomer_WDAD TPR_7

Other DBs

NCBI-GI:

301604597

NCBI-GeneID:

100492311

Position

AA seq 1680 aa
MAQILPIRFQEHMQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMAEPNS
PLRRPISAESAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMSEEVIFWKWISVNTVA
LVTETAVYHWSMEGDSQPQKMFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFAEFKIERNSKPSTLFCFAVRGQAGGKLHIIEVGQPANGN
QPFAKKAVDVFFPPEAQTDFPVAMQIGSKHGVIYLITKYGYIHMYDLESGACIYMNRISA
DTIFVTAPYEPTSGIIGVNKKGQVLSVCVEEENIVNYATSVLQNPDLGLRMAVRSNLPGA
EELFARKFNTMFAQGNYSEAAKVAASAPKGILRTAETIRKIQAVPAQPGQASPLLQYFGI
LLDQGQLNKLESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKTVDPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRSVMRISPDQGLQFAQMLVQDE
EPLANINQIVDVFMENSLIQQCTSFLLDALKNNRPSEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNAEWLVNFFGSLSV
EDSVECLRAMLSANIRQNLQLSVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRIPAVVGGLLDVDCSEDVIKNLIMVVHGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSCVVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDAELWANVL
EENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTAELPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNQLFEEAFAIFRKFDVNTS
AIQVLIEHIGNLDRAYEFAERCNESAVWSQLGRAQLQKDLVKEAIDSYIKADDPSSYMEV
VQAASRNSNWEDLVKFLQMARKKARESFVETELIFALAKTNRLSELEEFVSGPNNAHIQQ
VGDRCYEEGMYDAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCFAC
VDGTEFRLAQMCGLHIVIHADELEELISYYQDRGYFEELIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWGELVFLYDKYEEYDNAIITMMN
HPTSAWKEGQFKDIVTKVANVELYYKALQFYMEYKPLLINDLLIVLSPRLDHTRTVNYFF
KVNQLPLVKPYLRSVQNHNNKSVNEALNNLLTEEEDYQGLRASIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLYKGNNRWKQSVELCKKDRLYKDAMLYAAESKDTDLAENLLQWFLEE
GKQECFAATLFTCYDLLHADIVLELAWRHHIMDFAMPYFIQVMREYLTKVDKLHAAESLR
KEAEQVTEPTPIVFGQQLMLTAGPSGVVPPQPNFPYGYAAPTNFTQPPPPSVSPGYGLNM

NT seq 5043 nt +upstreamnt +downstreamnt
atggcgcagatattgcctatccggtttcaggagcacatgcagctccagaatctggggatc
aatccagccaacattggttttagcacacttaccatggaatcggataagtttatctgcatc
cgggagaaggttggagaacaggcacaggtggttatcatagatatggctgagccaaacagc
ccactgagacgccctatctcagctgaaagtgctataatgaaccctgcctccaaagttata
gcattgaaagctgggaaaactcttcagatttttaacatagaaatgaagagcaaaatgaaa
gctcatactatgtccgaagaggtcatcttctggaagtggatatccgtcaacactgttgcc
ctggtgacagagacagcagtttaccactggagcatggagggtgactcccagcctcagaaa
atgtttgatcgccatgccagtcttgctggttgccagattatcaactataggactgatgaa
caacaaaaatggcttctcttgatcggtatctctgctcagcaaaacagagtggtgggtgca
atgcagctctactctgtagacagaaaagtctcacaacccatagaagggcatgctgctgca
tttgccgaatttaagattgaaagaaactcaaagccttccacacttttctgctttgctgtt
cgtgggcaggcaggaggcaagttgcacatcatagaagttggacagcctgccaatgggaac
cagccttttgccaagaaagctgttgatgtgttctttccccctgaggctcagactgacttc
cccgtggctatgcagattgggtctaagcatggagtaatctatttaatcacaaagtatggc
tacatccacatgtatgacctggagtctggagcctgtatctatatgaatcgtatcagtgct
gacaccatctttgttacagctccttatgaacccacctcaggaatcattggggttaataag
aaaggacaggtgctctctgtctgtgtggaagaagaaaatattgtgaattatgccaccagt
gtactacaaaacccagacctgggtttgcgcatggctgttcgcagtaacctcccaggggct
gaagaactttttgcaaggaaatttaacacaatgttcgcccaagggaactattcagaggca
gctaaagtagcagcatctgccccaaagggaattttgcgtacggctgaaaccatcagaaag
atccaggcagtgccagctcagcctggacaggcttctcccctgctccagtattttggcatt
ctactcgatcaggggcagctgaacaagctagaatcgctagagctctgcaggccagtcttg
caacagggccgtaagcagctcttagagaagtggttaaaagaagataagcttgaatgttct
gaggagcttggggacttggtgaagactgtagatccaactcttgctctgagtgtttatctg
cgtgccaatgtgccaaacaaagtgatacagtgctttgcagaaacagggcagttccagaaa
attgtactttatgctaaaaaggttggttacaccccagactggattttcctccttcgtagt
gtaatgcggatcagtccagaccaggggctgcaatttgcacagatgcttgttcaggacgaa
gagccacttgcaaatatcaaccaaattgtggatgtcttcatggagaacagtctgatccag
cagtgcacttcattcctgcttgatgctctcaaaaacaatagaccatctgaaggccacctc
cagactcggcttctagagatgaatttgatccatgctccacaggtagcagatgcaatcctg
gggaaccagatgtttacccattatgatcgagcccacattgcccagctgtgtgaaaaagct
ggactactgcaaagagctctggagcattacacagatctttatgacattaaacgggccgtg
gtgcatacacaccttctgaacgcagaatggctggtgaatttttttggctcactatcagtg
gaagattctgttgagtgccttcgagccatgctgtctgccaacattcgccagaacctacaa
cttagtgttcaagtggcatctaagtaccatgagcaacttgggacccagtcattggttgag
ctttttgagtcattcaagagttatgaaggtcttttctactttctgggatcaattgtcaat
ttcagccaagatcctgatgttcactttaagtacatccaggcagcctgcaaaacagggcaa
ataaaagaagttgaacggatatgcagggagagcaactgctataacccagagcgagtcaaa
aattttctgaaggaggctaaactcacagatcagcttccactgattattgtctgtgaccgt
tttgattttgtccatgacttggtcctgtatctgtaccgtaacaacctccagaagtacatt
gaaatttacgtgcagaaggtaaaccccagccgtatcccagctgtagtgggagggcttctg
gatgtagattgttctgaagatgtaataaaaaatctgataatggtggttcacgggcagttc
tctactgatgaattagtagcagaagtggagaaaagaaacaggttgaaattacttctgcct
tggctggaatcccgaatccatgaggggtgtgaggaaccagctacacataatgccctagca
aaaatctatattgacagcaataacaacccagaacgcttccttcgtgaaaacccctactat
gacagctgtgttgtgggcaagtactgtgaaaaaagagaccctcaccttgcctgtgtggca
tatgagagaggccaatgtgaccttgagctcattaaggtgtgcaatgaaaactccttgttc
aagagtgaggcccgttaccttgtacgtagaaaagatgcggaactgtgggcaaatgtccta
gaagaaaacaatccattcaggagacaattgattgatcaggtggtgcagactgctttgtca
gagacacaagacccagaagaagtgtcagtgactgtgaaggcgttcatgactgctgaactc
cccaatgagctgattgagcttctggagaaaatagtgctggataattcagttttcagtgag
cacagaaacttgcaaaatctcctcattttgacagcaattaaagctgaccgaactagagtg
atggaatacatcaaccgtttagataattatgatgcacctgatattgctaatatagctatc
agcaaccagctttttgaggaagcttttgccatattcaggaagtttgatgtgaacacatct
gcaatacaagttttgattgaacacatagggaatttggaccgtgcatatgaatttgctgag
aggtgtaatgagtcagctgtatggagtcagttgggccgagctcagctccagaaggatctc
gttaaagaagctatagactcttatatcaaagccgacgatccttcatcttatatggaagtt
gtacaggctgctagtaggaacagtaactgggaagacttggttaaattcttgcagatggca
aggaagaaggccagagaatcttttgtagagactgaacttatttttgcactggcgaaaaca
aatcgtctctctgagcttgaggagtttgtcagtggccccaacaatgcccacattcagcag
gtgggagaccgctgttatgaagaaggcatgtatgatgctgccaagctgctctataataat
gtttctaactttgctcgtttggcatctacattggtacatcttggggaatatcaggctgct
gtggatagtgcaagaaaagccaatagcacccgcacttggaaggaggtctgttttgcttgt
gtcgatggaacagagttccgcctggctcaaatgtgtggcctgcacattgtgattcatgca
gatgagcttgaagagctaatcagttattaccaggatcgtggatattttgaggagctaatt
gctctactagaagcagcattgggtttggagcgagcccacatgggaatgttcactgaactc
gccattctgtactcaaagtttaagcctcagaagatgcgggagcatctagagcttttctgg
tcacgtgttaatattcccaaggtcctgcgggcagctgagcaggcccacctctggggtgaa
ctggtctttttatatgataaatatgaagaatatgataatgccattatcaccatgatgaac
catccaaccagcgcctggaaggaaggacaatttaaggatattgttaccaaggttgccaat
gttgagctgtattacaaagctttgcagttttacatggagtacaaacctcttttaatcaac
gacctcctcatagtattatctccacgtctagaccacactcggacggtcaactattttttt
aaggtcaatcagctgcccttggttaagccgtacctccgctcagtgcaaaaccacaataac
aagtcagtaaatgaggctctcaataatctactgactgaagaggaggattatcagggtctg
agagcatccatcgatgcatatgataactttgataacatcagtctagcccagcgactggag
aaacatgagctgattgaatttcgcagaattgcagcttatctgtacaagggaaacaaccgt
tggaagcagagtgtagaactgtgcaaaaaggatcgactgtataaggatgccatgctgtat
gctgcggaatcaaaggatactgacctggctgaaaatctgttacagtggtttttggaagaa
gggaagcaggagtgttttgccgccactctgtttacctgttatgacttgctgcatgcagat
attgtgctcgaacttgcctggagacaccatattatggattttgctatgccttatttcatc
caggtcatgagggaatatcttactaaggtggacaagctgcatgctgcagagagtttgagg
aaggaagccgaacaggtaacagaacctaccccaattgttttcggtcagcaactgatgctt
acagctggtcctagtggtgtggtgccacctcagcccaacttcccctatggatatgctgcc
cccactaacttcacccagcctcctccaccctctgtctctcctggctacggcttaaacatg
taa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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