KEGG   Xenopus tropicalis (tropical clawed frog): 100493346
Entry
100493346         CDS       T01011                                 
Symbol
sec24b
Name
(RefSeq) protein transport protein Sec24B isoform X1
  KO
K14007  protein transport protein SEC24
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100493346 (sec24b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xtr04131]
    100493346 (sec24b)
Membrane trafficking [BR:xtr04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    100493346 (sec24b)
SSDB
Motif
Pfam: Sec23_trunk Sec23_helical Sec23_BS zf-Sec23_Sec24 Gelsolin Sen15
Other DBs
NCBI-GeneID: 100493346
NCBI-ProteinID: XP_002939332
Xenbase: XB-GENE-1007271
UniProt: A0A6I8R6F1
Position
1:67672033..67717797
AA seq 1103 aa
MLSQNSMPQHQPSLVNTNHLSHKFYHNPSPGHDIPASQKTAEGVGLSATQGPPGVLQPYP
AFSGDYSYASYPANSSYTPQGLPNYSDRISSTVSSQHYSGAQYTNLPASTQYGQVIYSHN
VHAVAQVTNTVQNVHASGPPSLLHQDLKRHNAAPLPTVEQHGAQDVHMQNYGVSFGQQNI
NSAHSVADGQSPRPEAKTSPVSLHHSALQEGMQFGGYNHANCAPTPSSSSSDDEEEEDDE
EAGFESSSTTSTASLEPKNYDVLEGGCYTEPSSTTSTPAFLNPVSQSSKQTKPFGHGYPT
LQPGYQNAAPPSHSSQSSTPVHRPSYQQYNSNYSGLNQLPASLGGLSLQQAQQPEGPRPV
NLIQDRNLLPVLNVPAPIPNLNSDLKRLNCNPNSFRSTLTNIPQTQALLNKAKLPLGLLI
HPFRSKPRIPVLSPSTIVRCRSCRTYINPFVSFIDQRRWKCNLCYRVNDVPEEFMYNPVT
RSYGEPHKRPEVQNASVEFIASSDYMLRPPPPAVYLFVLDVSYNAVESGYLKVFSQSLLD
NLDKLRGDSRTKIGFITFDSTVHFYNLQEGLSQPQMLIVTDIEDVFLPTPDGLLVNMHES
KELIKDLLTALPSMFANTKETHSALGPALQGAFKLMSSTGGRISVFQTQLPSIGAGLLQS
REDPNQRSSTKGVQHLGPATDFYKKLALDCSGQQTAVDLFLLSSQYSDLASLACMSKYSA
GCVYYYPMYHHTHNSAQTEKLKKDLDHYLTRKIGFEAVMRIRCTKGLSIHTFHGNLFVRS
TDLLSLANINEDAGFAVQMSIEESLTDTSLACFQVALLYTSHKGQRRIRIHTLCLPVVNS
LPDVFAGADVQAVTCLLANMAVDRSVSSSLSDARDALVNAVVDSLASYNSTLSNLQQSTL
ISPNALRMFALYILALLKQKAFRTGTSTRLDDRVFAMCQMKCQPVVHLMKMIHPNLYRID
RLTDEGAILVNDSVVPQPPLQSLSAEKLSREGAFLMDSGSSLYIWIGRNCSNTFLSDVLG
FQNYASVPQKLACLPDLNTTASERLRNFISWLKEDSPLNPVLHVIKDDSAAKTDFFQHLI
EDRTEAAFSYYEFLLHIQQQVCK
NT seq 3312 nt   +upstreamnt  +downstreamnt
atgttgtctcaaaattctatgccacagcatcagcccagtttagtaaatacaaatcatttg
tcccataagttttaccataatccgtcaccaggtcatgatattccagcttcacaaaaaaca
gctgaaggggtaggtctttctgccacccaggggcctcctggtgttttacaaccataccca
gcatttagtggcgactacagctatgcgtcttatcctgctaactcctcatatacacctcag
ggattacctaattattctgatcgcatttcttcaactgtgtctagtcaacactattcagga
gctcagtacacaaacttgcctgctagcacacagtatggtcaagtgatatactcccacaat
gttcatgcagttgctcaagtgacaaatacagtccaaaacgtgcacgcatctggtccccct
tctctacttcatcaggacttaaagaggcacaatgcagcccctctgcccactgtagaacaa
catggtgcccaggatgttcacatgcagaattatggagtatcttttggacaacagaatatt
aattcagcccattctgttgctgacggccagtcgccaaggcctgaagctaaaacatctcct
gtatccttacatcattctgcattacaagaaggcatgcagtttggtggatataatcacgct
aattgtgcaccaactccctcttcatctagttcagatgatgaggaggaggaggatgatgag
gaagcaggttttgaaagctcctcaacaaccagcacagcatccctagagcctaagaattat
gatgttttagaaggaggatgttatacagaaccatcttcaacaaccagcacaccagcattt
ttgaatcctgtttcacaatcatccaagcagaccaagccgtttggccacggatacccaact
cttcaacctggttaccagaatgctgctccaccttcacatagctctcagtccagtactcca
gtacatcggcctagctatcagcaatataattctaattacagtggattgaatcagctgcct
gcctcccttggaggattaagccttcaacaggctcagcagccagaaggcccgcgtcctgta
aaccttatacaagatcgaaatctccttcctgtattgaatgtgccggctccaattccaaac
ctaaattcagatcttaaaaggttaaactgcaaccccaattcatttaggtctacactgaca
aatattccacagacacaagctctcttgaacaaagctaaacttcctttaggattactaatt
catcccttcagaagcaaaccgcgaataccagtcttgtctcctagtaccattgtaaggtgc
aggtcttgcagaacttatattaatccctttgtatcgtttattgaccagaggaggtggaaa
tgcaacctgtgctacagagtaaatgatgtaccagaggaatttatgtataatccagtgact
cgatcttatggtgagcctcacaaacgtccagaggtccagaatgcatctgtggagtttatt
gcatcatctgactatatgctacggcctccaccaccggcagtatatctgtttgttctggat
gtttcatacaatgctgtagaatctggatacttaaaggtcttctctcagtctcttctggat
aatttggacaagttacgaggagattcccgaacaaaaataggatttattacttttgatagt
actgttcatttttacaatttacaagaaggcctatctcagccccagatgttgattgttacg
gatattgaagatgttttcttacctacacctgatggtttgcttgtaaatatgcatgaaagc
aaggagctcatcaaggatctgttaactgctttgcccagcatgtttgccaacacaaaagaa
acccacagtgctctaggtcctgcccttcaaggagctttcaaattgatgtcttctacagga
ggccggatttcagtttttcaaactcagctgccatctataggagcaggacttttgcagtca
agagaggacccaaatcaaagatcaagtactaagggtgtgcaacatttgggcccagccact
gacttttataagaaactagcgctggactgctcaggacaacaaactgctgtggatttgttt
ttgttaagttcccagtactctgaccttgcctcactagcttgtatgtcaaagtattctgca
ggatgtgtatattactatcccatgtaccatcatacccataattcagcacagacagaaaag
ttaaagaaagatcttgatcattatctcacaagaaagattggatttgaagcggtaatgaga
atacgatgtactaaaggtctctcgatacacactttccatgggaatttatttgtacgttct
actgatcttctgtcacttgctaacattaatgaagatgctggttttgcagtacaaatgtcc
attgaggaaagcctgactgacacgtctcttgcttgttttcaagttgcactactttataca
tctcacaaaggtcagcgtaggattcgcattcatactttgtgcttgcctgttgtaaattca
ctgcctgatgtgtttgctggagcagatgtgcaagctgttacttgccttttggcaaatatg
gctgtagaccggtcagtttcctcaagtctttctgatgcacgagatgctttagtaaatgcg
gtagtcgattcattggcatcctacaattcgacactttcaaaccttcagcagtcaacactg
atttcaccaaatgctctcagaatgtttgcactctatatattggcactactgaaacagaaa
gccttccggactggcactagtacgcgcctggatgatagagtctttgcgatgtgtcaaatg
aaatgtcagccagttgtccatctgatgaagatgattcatccaaacctatacagaatagac
aggcttaccgatgagggtgctatccttgtaaatgacagcgttgttccacaacctcctctt
cagtctttatcagcagaaaaactgtcaagggaaggggcattccttatggattctggttca
tctctctacatttggataggaaggaattgttcaaatacctttttaagtgatgttcttgga
tttcaaaactatgcatcggttccacaaaaattggcctgtctcccagatttaaacacaaca
gcatcagaaagactgagaaactttatttcatggctgaaagaagatagtccattaaaccct
gttctgcatgtgataaaggatgacagtgcagcaaagactgacttcttccaacatttaatt
gaagaccgaacagaagctgcattttcatactatgagtttcttcttcatattcagcagcaa
gtttgcaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (20)   

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