KEGG   Xenopus tropicalis (western clawed frog): 100494415Help
Entry
100494415         CDS       T01011                                 

Gene name
traf2
Definition
TNF receptor-associated factor 2
Orthology
K03173  
TNF receptor-associated factor 2
Organism
xtr  Xenopus tropicalis (western clawed frog)
Pathway
MAPK signaling pathway
Protein processing in endoplasmic reticulum
Apoptosis
RIG-I-like receptor signaling pathway
Adipocytokine signaling pathway
Herpes simplex infection
Brite
KEGG Orthology (KO) [BR:xtr00001]
 Genetic Information Processing
  Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100494415 (traf2)
 Environmental Information Processing
  Signal transduction
   04010 MAPK signaling pathway
    100494415 (traf2)
 Cellular Processes
  Cell growth and death
   04210 Apoptosis
    100494415 (traf2)
 Organismal Systems
  Immune system
   04622 RIG-I-like receptor signaling pathway
    100494415 (traf2)
  Endocrine system
   04920 Adipocytokine signaling pathway
    100494415 (traf2)
 Human Diseases
  Infectious diseases
   05168 Herpes simplex infection
    100494415 (traf2)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
Position
Un
AA seq 475 aa AA seqDB search
MAAAAAVSGSPQGSLDLNQPGFKKEILGTKLEVKYLCSDCKNLLRRPLQAQCGHRYCSHC
LNKIIRPSLLCSQVGHEGKCPYLLAPCPACKTIIRAANRDLHSERECPERKLNCRYCKLS
FYFPDIKAHDEICPKFPMTCEGCGRKKIPREKFPDHVKICGRCKVPCRYAAVGCTEMVEN
DKCLEHENKSLAEHLAKVWDYIQHGRKEQNDLSVRMGSLSVQGSPAPPANAPPNNSAKVA
EMLLKFDTLDKKNTTFENIVSVLNREVERSSHAAEELARQLRAAQEKVEALTTKVRQLER
TLGQKELIVAELETRMQESELSTYDGVFIWKISEFGKKRQDAINGRCPAMFSPPFYTNKY
GYKMCLRIYLNGDGTGRNTHLSLFFVVMKGNNDALLRWPFNQKVTLMLLDQNNREHVIDA
FRPDVSSSSFQRPISEMNIASGCPLFCQVSKLEGKNSYVRDDTIFVKVIVDLTGL
NT seq 1428 nt NT seq  +upstreamnt  +downstreamnt
atggccgcagcagccgcagtgtccggctctccgcagggatctctggacctgaaccaaccg
gggtttaagaaggagattctgggcaccaagctcgaggtgaagtacctgtgttccgactgc
aagaatttattacggagacccctccaggcccagtgtgggcaccgctactgctcccattgc
ctcaacaagatcatcagaccgtctcttctctgttcccaggttggccacgaggggaagtgc
ccgtacttgttggcgccgtgcccggcctgtaagactataatccgcgccgccaatagggac
ttgcacagcgagcgagagtgcccggagcgcaagctgaactgccgatactgcaagttgtcc
ttttacttccctgacattaaggcgcacgatgagatctgccccaagttccccatgacgtgc
gaaggctgcgggcgcaagaagatcccgcgggagaagttcccagaccacgttaaaatctgt
gggaggtgcaaagtgccgtgtcgatatgcagcagtcgggtgcaccgagatggtggagaac
gacaaatgtctggagcacgaaaacaaatcattggccgagcacttggccaaagtgtgggac
tacattcagcacggccgaaaggagcagaacgacctgtcagtccgtatggggtcactgtcc
gtgcagggcagccccgcccctccggccaacgctccgcccaacaactccgccaaggtcgcc
gaaatgctgctcaagttcgacaccctggacaagaaaaacacaacgttcgagaacatcgtg
agcgtcctgaaccgggaggtggagcggtcgtcgcacgcggccgaggagctcgccaggcag
ctacgggcggcgcaggagaaagtggaagctttgactaccaaggtccgacagctggagcgc
actctggggcagaaggaactgatcgtggcggaactggagacgcggatgcaggagtcggaa
ttatccacctacgatggggtgtttatttggaaaatctctgagttcggcaagaagagacag
gacgccatcaacgggcgatgccccgccatgttctccccacctttttacactaacaaatac
ggctacaaaatgtgcctgcgcatctacctgaacggggacggcaccgggcgcaacacccac
ctgtcgctcttcttcgtggtgatgaagggaaacaatgatgctttgctgcgctggcccttt
aaccagaaggtcaccctgatgctgctcgaccagaacaaccgcgagcatgtgatcgacgcc
ttccggcccgacgtctcgtcgtcctccttccagcgcccaatcagcgagatgaacatcgcc
agcgggtgcccgctcttctgccaggtctccaagctggagggcaagaactcgtacgtccgc
gacgacaccatcttcgtaaaggttatagtggatctgactgggctctag

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