KEGG   Xenopus tropicalis (tropical clawed frog): 100497210
Entry
100497210         CDS       T01011                                 
Symbol
chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
  KO
K20091  chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xtr03036]
    100497210 (chd2)
Chromosome and associated proteins [BR:xtr03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    100497210 (chd2)
SSDB
Motif
Pfam: SNF2-rel_dom CDH1_2_SANT_HL1 Helicase_C CHD1-like_C Chromo ResIII HDA2-3 CHDCT2
Other DBs
NCBI-GeneID: 100497210
NCBI-ProteinID: XP_002933353
Xenbase: XB-GENE-950755
UniProt: A0A6I8Q0Q2
Position
3:112466066..112512023
AA seq 1809 aa
MMRNEDKPGEEDGSAHSNASSHSASEESNHSVYGSESASQSESEHVTEQGSESNSSSESS
ESHSESDCESTGSKTHDALAESKEKPLPKKERLADVKKMWEEYPDVYGVRRSNRSRQEPS
RFNIKAESSDSESESPRRRSMRSTRKKEKNIVSDDEDEEGSSAESDAEQTKFRSSRLQQK
RKLAKSSTNKLKRSLRGKKRKQASSEEEDDDDDDDDDDETPKRQTRRRAAKNVSYKEDDD
FETDSDDLIEMVGEEAEELEDSHETIEKVLDSRIGKKGAIGASTTVYATEENGDPNSEFN
PETDEREQQYLIKWKGWSYIHGTWESEDSLQQQKVKGLKKLENFKKKEEEIKQWLSKVSP
EDVEYFSCQQELASELNKQYQIVERVIAVKTSKSSSGHSDFPVHSRKTSSSNEPEYLCKW
MGLPYSECSWEDGALVGKKFQHCIDSFNCRNNSKTTPVKDCKVLRQRPRFVTLKKQPSYI
GGEGLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHLHLLYGPFL
LVVPLSTLTSWQREFEVWAPDINVVVYIGDLGSRNTIREYEWVHQQSKKMKFNALLTTYE
ILLKDKAVLSSINWAFLGVDEAHRLKNDDSLLYKTLIEFKSNARLLITGTPLQNSLKELW
SLLHFIMPEKFECWEDFEDQHGKGRDNGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQIL
RVEMCVMQKQYYRWILTRNYKALSKGTRGSTSGFLNIVMELKKCCNHCFLIKPEETEKES
RLDSLQSLIRSSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLAIKHYPFQRLD
GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ
ARAHRIGQKKQVNIYRLVTRGTVEEDIIERAKKKMVLDHLVIQRMDTTGRTVLDNNSGSS
NCNPFNKDELAAILKFGAADLFKETEGEELEPQEMDIDEILRLAETRENEPSSSATDELL
SQFKVANFATMEEEPEMVLKREQEWDDIIPEGQRKKVEEEARQKELQEIYMLPRIRSLNK
KPQANDSESDLESKQKAQRSSGSESDSDDSDDDKKPKRRGRPRSVRKDNVEGFTDAEIRR
FIKAYKKFASPLERLECIARDAELVEKSVADLKRLGELLHNSCASAMQEFEEQLKENPAD
GKGPGKRRGPTIKISGVQVNVKAIIQHEEDFEVLSKSIPADPEEKKKFNVVSRVKAAHFD
VEWAIEDDSHLLLGIYEHGYGNWEHIKSDPELKLSEKILPVDTEKKPQAKHLQTRADYLL
KMLKKEMEKETGAAEEPKSKKRKPRAKKDSGKTKDEHGNDISSPRHSDNNSEEGEEKEDG
TEKNTNKKKQKKKDNKENKDKQTQKKEGDKDKKKAKDKKEKAKRGEAKPGGKNRKNQGPV
HITAGSEPVPIGEEEEDDLDQETFSICKERMRPVKKALKQLDNADKGLSVQEQLEHTRTC
LLKIGDRISECLKMYSDQEHVKLWRRNLWIFVSKFTEFDARKLHKLYKMAHKKRSQEEED
HKKKDVSVKKPFRPEQSGSSRDPHVSQSQGPHTPQKPVIVPPHTQQVHSHQRENFGSPNK
RPFNNAERGEWRDRKFNYGGNNSNQPWGGDRHHQYDQHRYKDHHYSERRPHGDPRRSSAN
FRPNNMSRKRPYDQYNNDRDHRGHRDYYDRHHHDNKRRRSDDFRPQSYHQQDFRRMGSDH
RPPMGYHSQGPSDHYRSFHSEKSGDYKGPSQSTSLSDPRSPPTQRSPHDNKPPLDRSLEQ
KSGDYNWNR
NT seq 5430 nt   +upstreamnt  +downstreamnt
atgatgaggaatgaggataaacccggggaagaggacggctcagctcatagcaatgcatcc
agtcattctgcctcggaggagtccaatcactctgtttatggatcggaatctgcaagccag
tcagagagtgagcatgttactgagcaaggcagtgaatcaaacagcagctctgagtcctca
gaaagccattcagaatcagactgtgaatcgactggctcaaagacacatgatgccctggct
gaatccaaggaaaagcctctccctaaaaaggagagactggctgatgtgaagaagatgtgg
gaagaataccctgatgtttatggagttaggaggtcaaaccggagtagacaggagccatca
cgatttaatataaaagctgagagtagcgattctgaaagtgaaagccccagaagaagaagt
atgcgatcaacaaggaaaaaagagaaaaacatagtttccgatgatgaggacgaggaagga
agcagtgcagaaagtgatgcagaacaaactaaatttagatcatcccgtttgcagcagaag
agaaaattggccaagagcagcacaaacaagctgaaaaggtctctgcgtggaaaaaagcga
aaacaagcatcgtctgaggaagaggatgatgacgacgacgatgatgatgacgatgaaact
cccaagagacaaaccaggcgcagggcagctaaaaatgtcagctacaaggaagatgatgac
tttgagacagattcggatgatctgattgaaatggtgggcgaggaagcagaggaactggaa
gatagtcatgaaacaatagagaaagttttggactccagaattggaaaaaagggagccatt
ggagcttccactactgtgtatgcaacagaagaaaatggggatcctaactctgaatttaac
cctgaaactgatgaaagggagcaacaatatcttattaagtggaaaggctggtcttacatc
cacggtacctgggagagtgaagattctcttcagcagcagaaggtgaaaggcctgaaaaag
cttgagaacttcaagaaaaaggaggaagaaatcaagcaatggttatcaaaagtttcacct
gaggatgtagaatacttcagctgccagcaagaacttgcatccgagctgaacaagcagtat
cagatagttgagagggtcatagctgtaaaaacaagcaagtcgtcttctgggcactcagat
tttccagttcacagcaggaagacttcctcctccaatgaaccggagtatctgtgcaagtgg
atgggtctcccatattctgaatgcagctgggaagatggtgcccttgttgggaagaagttc
cagcactgtattgacagttttaactgcagaaacaactcaaaaacaacacctgtaaaagac
tgcaaggttttgaggcagagaccaaggtttgtcaccttaaaaaagcagccttcttacata
gggggtgaaggacttgaactgcgtgactaccagctagagggtttgaactggctggctcac
tcttggtgcaagaataacagtgtgattcttgctgatgagatgggcttgggaaagaccatc
caaacaatttcatttctctcctatctgttccacctacacctgctttatgggccctttctt
ttagtggtgcccttatcaactctgacatcctggcagagggagtttgaggtctgggcacca
gatataaatgtggtggtttacattggagatctcggtagcagaaacacgatacgtgaatat
gaatgggtccatcagcaaagcaagaagatgaaatttaatgcactacttacaacgtatgaa
attttgctgaaggataaagctgttctgagtagtattaactgggctttccttggggtggat
gaagcccatcgactaaagaatgatgattctttactttataaaacactcattgaattcaaa
tctaacgcccgactgctgatcactggtacacctcttcagaactcgcttaaggagctgtgg
tcactcctgcactttattatgccagagaaatttgaatgttgggaagacttcgaagatcag
catggcaaaggaagagacaatggttatcaaagcctacacaaagtcctagaacctttttta
ctacgcagagtgaagaaagatgtggagaagtctcttccagccaaagtagaacagatactc
cgggtagagatgtgtgtcatgcagaaacagtattacaggtggatattaacaaggaactac
aaagcactctcaaagggaacaagaggcagcacttctggcttccttaacattgtcatggaa
cttaaaaaatgttgcaaccactgttttctaatcaaacccgaagagacagagaaagaaagc
agattggattcattgcagtctttgatcagaagcagtggaaagcttgttttgctagacaag
cttctgacgcggctgcgtgaaaggggaaacagagtacttatcttctcacagatggtgcgc
atgctggatatccttgctgaatacctggccatcaaacattaccctttccagcgactagat
ggatcaataaaaggagagttacgcaagcaggcacttgatcactttaacgcagaaggctct
gaggatttttgttttctgttgtcgacacgcgctggcggcctaggtataaacttggcatcg
gccgacaccgtggtcatcttcgattcagactggaatccacaaaatgatttgcaggcacaa
gccagagctcatcgtattggccaaaagaaacaggtaaatatataccgacttgtcacgagg
ggcacagtagaagaagatataatagagcgagccaaaaagaagatggttctggatcatctg
gtcatccagcgtatggatacaacaggcagaactgtactggacaataactcaggcagctcc
aattgtaacccatttaacaaagatgaacttgctgctattctaaagtttggagctgctgat
cttttcaaggaaactgaaggagaggaattagaacctcaggaaatggatatagacgaaatt
ttacgtcttgcggaaactcgagagaacgagccatcttccagtgctactgatgagttgctg
tctcagttcaaggtagctaactttgcaacaatggaggaagagcctgaaatggttttgaag
cgcgaacaggaatgggatgacataattcctgaggggcaaagaaaaaaagtggaggaggag
gctcggcagaaagaactacaggaaatatacatgcttcccaggatcaggagcttgaacaag
aagcctcaagcaaatgacagtgagtctgatttggagtcaaagcagaaagctcagcgttcc
tctggatccgagagtgactcagatgactccgatgatgacaaaaagccaaagcgcagagga
cggccacgaagtgttaggaaagacaatgttgagggatttactgatgctgagatcagacgg
tttattaaggcttacaagaagtttgcttctccactggaaagactggagtgcattgcccga
gatgcagagcttgtggaaaaatctgtggcagatctcaagaggttgggtgaactgctgcac
aacagctgtgcttcagccatgcaggaattcgaagagcaattaaaagaaaaccctgctgat
ggaaaaggtccaggcaagcgcaggggacccacaattaaaatctctggtgtgcaagtgaat
gtaaaagctattattcagcacgaggaagactttgaagttctcagtaaatccatcccagct
gacccagaagaaaagaaaaagtttaacgtggtgagtcgagttaaggctgcccattttgat
gtggaatgggcaatagaagatgattcccatttacttcttggtatatatgaacatggctat
ggcaactgggaacatattaaaagtgatcctgagctgaagttgtctgaaaagattttacct
gtggatacagagaagaaaccacaagctaaacatttacagacaagagcagattatctgctg
aaaatgctgaagaaagaaatggaaaaagaaacgggtgctgcagaggagcctaagtcaaag
aaaagaaagccacgagcaaagaaagatagcggcaaaactaaagatgagcatggcaatgac
atttcatctcccagacactctgacaacaattccgaagagggggaggaaaaggaggatggc
acagaaaagaacacaaacaagaaaaagcagaagaagaaagacaacaaggaaaacaaggat
aagcaaactcaaaagaaagagggagataaagataaaaagaaagcaaaagacaagaaggaa
aaggccaagcgaggtgaggccaagcctggtggtaagaacagaaagaaccaaggtcctgtt
catataacagctggtagtgaaccagtccccattggggaagaagaggaagatgacctggac
caagagaccttcagcatttgcaaagagagaatgaggcctgtcaaaaaagctctcaaacag
ctagataatgctgacaaagggctttctgtacaggaacaactggagcacacccgcacctgt
ttgctgaaaattggagaccgcatctctgagtgccttaaaatgtactctgaccaggagcat
gtgaagttatggagaagaaacctctggatttttgtgtctaagttcacagaatttgatgcc
aggaagctgcacaaattatataagatggcacacaaaaagagatctcaagaagaagaggat
cacaagaaaaaggatgtgtctgtcaagaaaccttttcgaccagagcaatctggatctagc
cgggaccctcatgtgtcacaatctcaagggccacatacaccacagaaaccggttattgtc
ccacctcacacccagcaagtgcatagccatcaaagagaaaactttggcagtcctaacaag
agaccttttaataatgcagagcgaggtgagtggagagaccggaaattcaattacggaggc
aataacagcaaccagccatggggtggtgaccgccatcaccaatatgaccagcataggtac
aaagatcaccattattcagaacgaagaccacatggggatccaaggagaagctctgcaaac
ttccggccaaacaacatgtcccgcaaaagaccatatgaccaatataacaatgatcgagac
caccgtggacaccgggactattatgacagacatcaccatgacaacaaacgaagaagatcc
gatgattttcgaccccagagttaccaccagcaggacttcagaagaatgggatctgaccac
cggccccccatgggctaccatagtcaaggaccttcagaccactaccgctcattccattct
gagaagtctggggattataaaggtccctctcaatcaacttctctctctgaccctcgctca
ccccctactcaaagatccccacatgataacaaaccacccctggacaggtcattagaacag
aaaagtggagattataattggaacaggtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (25)   

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