KEGG   Xenopus tropicalis (tropical clawed frog): 394569
Entry
394569            CDS       T01011                                 
Symbol
myod1
Name
(RefSeq) myoblast determination protein 1
  KO
K09064  myogenic factor 3
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xtr03000]
    394569 (myod1)
Transcription factors [BR:xtr03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Myogenic transcription factors
    394569 (myod1)
SSDB
Motif
Pfam: Myf5 Basic HLH
Other DBs
NCBI-GeneID: 394569
NCBI-ProteinID: NP_988972
Xenbase: XB-GENE-1017498
UniProt: Q7T109
Position
4:902672..903295
AA seq 288 aa
MELLPPPLRDMEVTEGSLCSFPTPDDFYDDPCFNTSDMSFFEDLDPRLVHVALLKPEDPH
HNEDEHVRAPSGHHQAGRCLLWACKACKRKTTNADRRKAATMRERRRLSKVNEAFETLKR
CTSTNPNQRLPKVEILRNAIRYIESLQSLLRGQEESFYPVLEHYSGDSDASSPRSNCSDG
MTDYSPPCGSRRRNSYDSSFYSDSPNGLRLGKSSVISSLDCLSSIVERISTESPVCPVIP
AADSGSEGSPCSPLQGETLSESGIIIPSPSNPCTHLSQDPSSTIYQVL
NT seq 867 nt   +upstreamnt  +downstreamnt
atggagctgttgcccccaccgctgcgggacatggaggtcactgaggggtctctctgctcc
ttcccgacccccgatgacttctacgacgacccctgtttcaatacctcggacatgagcttc
tttgaggacctggaccccagactggtgcatgtagccctcctgaagccggaggacccccac
cataatgaggatgagcatgtgcgggcccccagcgggcaccaccaggcgggcaggtgtctc
ttgtgggcatgcaaagcctgtaagaggaagaccaccaacgccgacaggaggaaggccgcc
actatgagggagaggaggaggctcagtaaggtcaatgaggcgtttgagaccctcaagcga
tgcacctcgaccaaccccaaccagaggctcccgaaagtggagattttgcgcaacgcgatt
cgctacatagaaagtctccagtctcttctccgcggccaggaggagtctttctaccccgta
ctggagcattatagcggggactctgatgcctccagcccccggtccaactgctccgatggc
atgacagactatagccccccctgcggctccaggagaaggaacagctacgacagcagcttc
tacagcgacagcccaaatgggctgagacttgggaagagctcggtgatctccagcctcgac
tgtctctccagcatcgtcgagcgaatctccaccgagagccccgtctgccccgtcattccg
gctgcggatagcggctccgagggcagtccctgttcccccctgcagggggagacactgagt
gagagcggaatcattatcccttctcccagcaacccctgcacccacctgtcccaggatccc
agcagcacaatctaccaggtcttatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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