KEGG T01011: 448522

Xenopus tropicalis (western clawed frog): 448522

Entry

448522 CDS T01011

Gene name

actn4, fsgs, fsgs1

Definition

actinin, alpha 4

Orthology

K05699

actinin alpha

Organism

xtr Xenopus tropicalis (western clawed frog)

Pathway

xtr04510	Focal adhesion
xtr04520	Adherens junction
xtr04530	Tight junction
xtr04810	Regulation of actin cytoskeleton

Class

Cellular Processes; Cell motility; Regulation of actin cytoskeleton [PATH:xtr04810]
Cellular Processes; Cell communication; Focal adhesion [PATH:xtr04510]
Cellular Processes; Cell communication; Adherens junction [PATH:xtr04520]
Cellular Processes; Cell communication; Tight junction [PATH:xtr04530]

SSDB

Motif

Pfam:

Spectrin CH EFhand_Ca_insen CAMSAP_CH EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_8 XisI EF-hand_5 CactinC_cactus

Other DBs

NCBI-GI:

NCBI-GeneID:

Xenbase:

UniProt:

Position

AA seq 904 aa
MVDYHMTSGGAPPHMGQLGQDQRYMEQEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKA
GTQIENIDEDFRDGLKLMLLLEVISGERLPKPERGKMRVHKINNVNKALDFIASKGVKLV
SIGAEEIVDGNTKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNVQN
FHISWKDGLAFNALIHRHRPELIEYDKLRKDDPVTNLNNAFEVAERYLDIPKMLDAEDIV
NTARPDEKAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEHLMEDYEKLASDLLE
WIRRTIPWLENRVPEKTMHDMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNTLQTKLRLS
NRPAFMPSEGKMVSDINNGWQHLEQAEKGFEEWLLNAIRRLERLDHLAEKFRQKALIHEA
WTEGKEAMLKQKDYESATLADIKALIRKHEAFESDLAAHQDRVEQIAAIAQELNELDYYD
SPSVNARCQKICDQWDLLGSLTHTRREALEVTEKQLEAIDQLYLEYAKRAAPFNNWMEGA
MEDLQDMFIVHTIEEIEGLIAAHEQFKSTLPDADREREAILGIQNEAQKIADYSHIKLAS
GNPYTTVTPQIINSKWEKVQQLVPKRDGALKGEHDKQQSNEHLRLQFASLANVVGPWIQA
KMEEIGRIAIELHGTLEDQMTHLKQYEQSVINYKPNIDKLEQQHQLIQEALIFDNKHTNY
TMEHIRVGWEHLLTTIARTSNEVENQILTRDAKGISQEQMHEYRASFNHFDRDHTGALGP
EEFKACLISLGYDVENDRQGDAEFNRIMAIVDPNNTGMVTFQAFIDFMSRETTDTDTADQ
VIASFKVLAGDKNYITAAELRRELPPDQAEYCIARMAPYQGPDAVPGALDYMSFSTALYG
ESDL

NT seq 2715 nt +upstreamnt +downstreamnt
atggtggattatcacatgaccagcggaggggcgccccctcacatgggccagctgggacaa
gaccaacggtatatggaacaggaggaggactgggatcgggacctgttgttggacccagca
tgggaaaagcagcagaggaagacttttacagcatggtgcaactcccatctaaggaaggcc
ggcacacaaatagaaaatattgatgaagatttcagagatgggttgaagctcatgttacta
ctggaagtcatctcaggagaacggctgcccaaaccagagcgaggcaagatgagggtgcat
aaaatcaataatgtcaataaagccctggatttcattgcaagtaaaggagtgaagttggtt
tccattggagcagaagaaattgttgatggcaatacaaaaatgacattaggaatgatctgg
acaattatcctgcggtttgccattcaggacatatctgtagaagaaacctctgcaaaggaa
ggacttcttttgtggtgccagaggaagactgccccttataagaatgtcaatgttcagaac
ttccacatcagctggaaggatgggctggctttcaatgccctaatccatagacatcgccca
gaactgatagagtatgacaagctgagaaaggatgacccagttactaacctaaacaatgct
tttgaagtagcagaaagatatcttgacattcccaagatgttggatgctgaagacattgtc
aacactgctcgtcctgatgagaaggcaatcatgacatacgtgtcctctttctaccacgcc
ttctctggagctcagaaggctgagacagcagctaacagaatttgtaaggtgttggctgta
aatcaagaaaatgagcatctaatggaggactatgaaaagctggctagtgatcttttggag
tggatccgtcgtacaatcccttggttggagaatcgtgtacctgaaaaaactatgcatgac
atgcagcaaaagctggaagatttccgagattaccgtcgtgtgcacaaaccacctaaagtg
caagagaagtgccaattagaaatcaacttcaacaccctgcaaacaaaactgaggctcagc
aatcgtcctgcttttatgccatcggagggcaagatggtttcggatattaataatggatgg
caacacttggagcaggctgagaaaggctttgaggagtggcttttgaatgcaatcagacgg
ttggagagactggatcacttggcagaaaagtttcgtcagaaagccctcatccacgaggcc
tggacagaaggcaaagaggcaatgctgaagcagaaagattatgaaagtgccacccttgca
gacataaaggcacttatccgaaaacacgaagcatttgaaagtgaccttgcagcccaccag
gatcgtgtagaacaaatagcagctattgcacaggaattaaatgagttggattactacgac
tcccccagcgtcaatgctcggtgccagaagatatgtgaccagtgggatcttctgggctcc
ttaacacacaccaggagagaagccctagaggtaacggagaaacagttggaagcaattgac
cagctgtacctggaatatgctaagcgagctgcaccattcaacaactggatggaaggagct
atggaggatttgcaagacatgttcatagtgcacaccattgaggagattgagggtctgatt
gcagctcatgagcagttcaagtccactcttccggatgctgaccgtgagagagaagccatt
cttgggattcagaacgaggctcagaaaattgcggattacagccacatcaaactagccagt
gggaatccttatacaactgtaactccgcagattattaactcaaaatgggagaaggttcag
cagcttgttcctaaaagggatggtgcattgaaaggagaacatgacaagcagcagtccaat
gagcacctgcgcttgcagtttgccagcctagctaatgtggtaggaccttggatacaggcc
aagatggaggagattggcaggattgctatagagttgcacggtactctggaagaccagatg
acccacctgaagcagtatgaacagagtgtcataaattacaagcccaatattgacaaactg
gagcagcagcatcagctcatccaggaagccctgatctttgataacaagcacactaactat
actatggagcacatccgtgtaggctgggaacatcttcttactacaatagctcgcacaagt
aatgaggtggaaaaccaaatccttacccgtgatgccaagggtatcagccaggagcagatg
catgaataccgggcatcattcaatcactttgatagggatcatacaggtgcattgggacct
gaagaattcaaagcatgtctgatcagtctgggatatgatgtggaaaatgacagacaggga
gatgcagagtttaaccggattatggctatcgttgacccgaacaacactggcatggttact
ttccaagcattcatagactttatgtcccgagagacaacagacacagacacagctgaccaa
gtcatagcctcatttaaggtcctggctggagataaaaattacatcactgcagcagagctg
cgtagagagcttcctccagatcaggcagaatattgcattgctcgtatggcaccctaccag
ggacctgacgcagtgcctggagcactggattacatgtctttctctactgctttgtatggg
gagagtgacttgtga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   UniGene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (11)   
   Pfam (11)   
All databases (30)   

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