KEGG   Xenopus tropicalis (tropical clawed frog): 493302
Entry
493302            CDS       T01011                                 
Symbol
pcna
Name
(RefSeq) proliferating cell nuclear antigen
  KO
K04802  proliferating cell nuclear antigen
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03030  DNA replication
xtr03410  Base excision repair
xtr03420  Nucleotide excision repair
xtr03430  Mismatch repair
xtr04110  Cell cycle
xtr04530  Tight junction
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    493302 (pcna)
   03410 Base excision repair
    493302 (pcna)
   03420 Nucleotide excision repair
    493302 (pcna)
   03430 Mismatch repair
    493302 (pcna)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    493302 (pcna)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    493302 (pcna)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:xtr03032]
    493302 (pcna)
   03400 DNA repair and recombination proteins [BR:xtr03400]
    493302 (pcna)
DNA replication proteins [BR:xtr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    493302 (pcna)
DNA repair and recombination proteins [BR:xtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     493302 (pcna)
   MMR (mismatch excision repair)
    Other MMR factors
     493302 (pcna)
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    493302 (pcna)
SSDB
Motif
Pfam: PCNA_C PCNA_N Rad1 Rad9 Hus1 AMA-1
Other DBs
NCBI-GeneID: 493302
NCBI-ProteinID: NP_001007921
Xenbase: XB-GENE-972522
UniProt: F6RT15
Position
3:123023407..123027549
AA seq 261 aa
MFEARLVQGSILKKVLEALKDLIDEACWDITSSGISLQSMDSSHVSLVQLTLRSDGFDTY
RCDRNQSIGVKMSSMSKILKCAASEDIITLRAEDNADTVTMVFESPNQEKVSDYEMKLMD
LDVEQLGIPEQEYSCVIKMPSGEFARICRDLSQIGDAVVISCAKDGVKFSASGELGTGNV
KLSQTSNVDKEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSPTVTLSMSADIPLVVEYK
IADMGHVKYYLAPKIEDEEAS
NT seq 786 nt   +upstreamnt  +downstreamnt
atgtttgaagctcgcttggtgcagggttccatcctgaagaaagtgctggaggccctgaag
gacctgatcgatgaggcgtgctgggacatcacatcgagcggcatcagcttgcagagcatg
gactcctcgcacgtctcgttggtgcagctcactctgcgatcggacggctttgacacctac
aggtgcgatcgcaatcaatccatcggcgtcaagatgagcagtatgtctaagatcttgaag
tgtgctgcaagtgaagatatcattactctgagggcagaagacaatgctgatacagttaca
atggtgtttgagtcgccaaatcaagagaaagtttctgactatgaaatgaagctaatggac
cttgatgtggagcagctgggcattcctgaacaagagtacagctgtgtaataaagatgcca
tctggtgaatttgcacgcatctgcagagatctaagccagattggtgacgcagttgttatt
tcttgtgcaaaggatggggtaaagttctctgcaagtggagagctgggcactggaaacgta
aagctgtcacaaacttcaaatgtggataaagaggaggaagctgttacaatagaaatgaat
gagccagtacagcttacatttgctttgcggtacctgaacttctttaccaaagctacaccc
ctgtccccaacagttacactcagtatgtctgcagatatcccacttgttgtggaatacaaa
atcgcagatatgggtcatgtgaaatattacctggctcccaagattgaagatgaagaagct
tcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (26)   

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