KEGG   Xenopus tropicalis (tropical clawed frog): 496706
Entry
496706            CDS       T01011                                 
Symbol
syf2
Name
(RefSeq) pre-mRNA-splicing factor syf2
  KO
K12868  pre-mRNA-splicing factor SYF2
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    496706 (syf2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xtr03041]
    496706 (syf2)
Spliceosome [BR:xtr03041]
 Complex B
  Other components
   Prp19-related factors
    496706 (syf2)
 Complex C
    496706 (syf2)
SSDB
Motif
Pfam: SYF2 Malate_DH
Other DBs
NCBI-GeneID: 496706
NCBI-ProteinID: NP_001032340
Xenbase: XB-GENE-920839
UniProt: Q28G05 B0JZS8
Position
6:complement(37286800..37293833)
AA seq 249 aa
MKSPSAAVTEDNETAGVSSKAESPPASTEDLAAQKREARLRKFRELHLKTNEARKLNHQE
VVEEDKRQKLPSNWEARKARLEWELKEEEKKRECAANGVDYERAKLLEISAEDAERWERK
KKRKNPDLGFSDYAAAQLRQYQRLTKQIKPDMEEYEMEKQKQGEMFYPTSESLYHGTHIP
SQSGIDRMVTDLEKQIEKREKYSRRRAYNDDADIDYINERNAKFNKKAERFYGKYTAEIK
QNLERGTAV
NT seq 750 nt   +upstreamnt  +downstreamnt
atgaagtcaccgagtgcagctgttacagaggataacgagacggcaggggtttcctctaag
gcagagtctccgccagccagcactgaggatttggctgcccaaaagagagaagcaagatta
agaaaatttcgagagctgcacttgaaaacgaacgaggctcgaaagttaaatcaccaagaa
gtagtagaagaagacaaacgacaaaaattgccgagtaactgggaggcacggaaagcccga
ttagaatgggagcttaaagaagaagagaagaaaagggaatgtgcagctaatggtgttgac
tatgagcgggcaaagctattggaaataagcgcagaagatgctgaaaggtgggagaggaaa
aagaagagaaaaaatcctgacctgggattttcagattatgcagcagcacagctacgccaa
tatcagaggctgacaaagcaaattaaaccagatatggaggaatacgagatggagaaacag
aagcaaggtgaaatgttctatcccacgtcggaaagtttgtaccatggtactcacataccc
tcccaatctgggattgacagaatggtcacagatcttgaaaaacagattgaaaaacgtgaa
aaatacagccgcaggcgtgcatacaacgatgatgctgatattgactacattaatgagagg
aatgcaaaattcaacaagaaggcagagagattttatggcaaatacactgcggagatcaaa
cagaacttggaaagagggactgctgtctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (10)   
   RefSeq(nuc) (2)   
   GenBank (4)   
   EMBL (4)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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