KEGG T01011: 496875

Xenopus tropicalis (western clawed frog): 496875

Entry

496875 CDS T01011

Gene name

thbs3, tsp-3

Definition

thrombospondin 3

Orthology

K04659

thrombospondin 2/3/4/5

Organism

xtr Xenopus tropicalis (western clawed frog)

Pathway

xtr04145	Phagosome
xtr04510	Focal adhesion
xtr04512	ECM-receptor interaction

Class

Environmental Information Processing; Signaling molecules and interaction; ECM-receptor interaction [PATH:xtr04512]
Cellular Processes; Transport and catabolism; Phagosome [PATH:xtr04145]
Cellular Processes; Cell communication; Focal adhesion [PATH:xtr04510]

SSDB

Motif

Pfam:

TSP_C TSP_3 COMP EGF_CA cEGF EGF_3 EGF

Other DBs

NCBI-GI:

NCBI-GeneID:

Xenbase:

UniProt:

Position

AA seq 959 aa
MARQSRDLLLLLLLSCLVCWARAARQEVHVIDLLTVSESRHMSGVVEKIRSELLAVNDLY
FLSTFRLPPKAGGVLFGLYSKKDNTKWLEASIVGKINKVLVRYMREDSKLHAVSLQNANL
SDGNMHTMILRVSGFRGDTLSLELYVDCKQVDTSLGLPEMMIIPQFEVESGDIRSGHKAY
LRMQGSVESMKLILGGSLSRVGALSECPFQEDESIHNTVNGVVNSILGEHTKALIAQMTL
FNKVLAELREDIRDQVKEMSLIRNTIMECQVCGFHEHRSRCNPNPCFQGVDCMETYEYPG
FRCGPCPPGSQGNGTHCADIDECSHANPCFSGSKCINTSPGFRCEHCPRGYKGNTVSGVG
VDYAKASKQVCKDIDECNDGNNGGCDANSICTNTVGSFRCGPCKPGFVGNQTVGCAPKKS
CASPAFNPCHLNGHCVFERSGDITCACNVGWAGNGYTCGRDTDLDGYPDEPMPCIDNNKH
CRQDNCRLTPNSGQEDADNDGIGDQCDEDADGDGIKNVEDNCRLVPNKDQQNSDTDSFGD
ACDNCPNVPNNDQRDTDANGEGDACDNDIDGDGIPNMLDNCPKVPNPLQTDRDLDGVGDA
CDSCPEASNPTQADADSDLVGDMCDTNQDRDGDGHQDTKDNCPDIPNSSQLDSDNDGKGD
ECDQDDDNDGIPDYMPPGPDNCRLMHNPNQKDSDGDGVGDVCEEDFDNDTVIDPLDVCPE
SAEVTLTDFRAYQTVILDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDF
EGTFHVNTVTDDDYAGFIFSYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGLQLKAVKS
TTGPGEQLRNALWNTGHTQDQVRLLWKDPRNVGWKDKTSYRWQLMHRPQVGYIRVKLYEG
VDLVADSGVIIDTNMRGGRLGVFCFSQENIIWSNLQYRCNDTIPEDFEPYRRGLQEGKD

NT seq 2880 nt +upstreamnt +downstreamnt
atggcgagacagagccgagacctcctcctactgctgcttctctcctgccttgtgtgctgg
gcacgggcagccaggcaagaggtgcacgtgatcgacctcctgacggtcagcgagtcccgg
cacatgtccggcgtggtggaaaagatccgctcggagctgctggcggtcaatgacctttac
ttcctgtccaccttccggctgccccccaaggcaggaggggtcctgtttggcctctactcc
aaaaaggataacaccaaatggttggaggcctccatagtgggcaagatcaacaaagtgcta
gtgcgttacatgagggaagactccaagcttcatgccgtcagtctacagaatgccaacctg
tcagatgggaatatgcacacaatgatcctccgcgtgagcggcttccggggggacactctc
tctctggaattgtacgtagactgcaagcaggtggacaccagcctggggcttccagaaatg
atgatcattccccagtttgaggtggagtctggggatatccgctctggacacaaagcctac
ctaaggatgcagggatctgtagagtccatgaaactgatcctcggtgggtccctgagtcgc
gtgggggctctaagtgagtgccctttccaggaagatgagtccattcacaacacagtcaac
ggagtggtcaattctatccttggtgagcacaccaaagctttgatcgcccaaatgactctc
ttcaataaagtgttagcggagctgagagaggacatacgagaccaggtcaaagagatgtcg
ctgatcaggaacaccatcatggaatgccaagtgtgcgggtttcatgagcaccgctcccgc
tgtaaccccaacccctgctttcaaggagtcgactgtatggaaacgtatgagtatccgggg
ttccgctgtggcccctgcccgccgggatcccaaggcaatggcacccactgtgccgatata
gatgagtgctcccacgccaacccttgtttctctggctccaaatgcatcaacacgtcaccg
ggcttccgctgcgagcattgcccacgggggtacaagggcaacaccgtgtctggggtggga
gtggactacgccaaagccagtaaacaggtttgcaaagacattgacgaatgtaacgatgga
aacaacggagggtgcgacgccaactccatctgcaccaacactgtgggatcattcagatgt
ggcccctgcaagcccggctttgtgggtaaccagacggtagggtgtgcccccaagaaatcc
tgcgccagcccagccttcaacccgtgccacctgaatgggcattgtgtgtttgagaggagc
ggagacatcacgtgcgcatgtaatgtcggctgggcagggaatggctacacgtgtggccga
gacactgacctggatggctacccagatgagccaatgccttgtatagacaacaataagcat
tgcaggcaggataactgccgcctgacgcccaactctgggcaggaagatgccgacaacgat
ggaattggggaccagtgcgatgaagatgccgatggggacgggatcaagaatgttgaggac
aactgccgcctggtgcccaacaaggaccagcagaactcggacaccgactcgtttggagac
gcctgtgacaattgccccaatgtgcccaataacgaccagagggacacggacgccaacggg
gagggagacgcctgtgacaatgacattgatggcgacgggatccccaacatgctcgacaac
tgccccaaagtgcccaaccccctgcagactgaccgagaccttgatggggtgggggatgcc
tgtgacagctgccccgaggccagtaaccccacccaggcagatgctgacagcgacttggtt
ggggacatgtgtgataccaatcaggacagggatggagatggccaccaggacaccaaagac
aactgccccgatatccccaacagctcccagttagactcggacaacgatgggaaaggagac
gagtgcgaccaagacgatgataatgatggaatccctgattacatgccaccagggccagac
aattgccggctgatgcataaccccaaccagaaggactcggatggggacggggttggagat
gtgtgtgaggaagactttgataacgacaccgtcatcgaccccctggacgtctgtcctgaa
agtgcagaagtcactctcaccgacttcagagcctatcagaccgttatcttggaccctgag
ggcgacgcccagatagaccctaattgggttgtgttgaatcagggaatggagattgtgcag
acaatgaacagtgaccctggcttggcagttggttatacggctttcaacggggtggacttt
gagggcacattccacgtaaatacggtgaccgacgatgactatgccggctttatcttcagc
taccaggacagttccagcttctacgtggtcatgtggaaacagacagagcagacctactgg
caggcaacccccttccgagctgtggcagagccgggactgcagctaaaggctgtgaaatcc
acaacgggccccggtgagcagcttcgcaatgccctgtggaacaccggtcacacccaagac
caggtccgtttgctgtggaaggaccctcgtaacgttggctggaaggacaagacttcttat
cgttggcagctcatgcatcgcccccaagtgggctacatcagggtaaagctttatgaagga
gttgacctggtggctgattccggagtaattatagacacaaatatgcgagggggacgattg
ggggtcttctgcttctcccaggagaacatcatttggtccaacttacagtaccggtgtaat
gacacaattccagaagactttgaaccgtaccgacggggtctacaggaagggaaggattaa

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   UniGene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (23)   

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