KEGG   Xenopus tropicalis (tropical clawed frog): 548888
Entry
548888            CDS       T01011                                 
Symbol
tfdp1
Name
(RefSeq) transcription factor Dp-1
  KO
K04683  transcription factor Dp-1
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03083  Polycomb repressive complex
xtr04110  Cell cycle
xtr04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    548888 (tfdp1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    548888 (tfdp1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    548888 (tfdp1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xtr03000]
    548888 (tfdp1)
   03036 Chromosome and associated proteins [BR:xtr03036]
    548888 (tfdp1)
Transcription factors [BR:xtr03000]
 Eukaryotic type
  Helix-turn-helix
   Fork head/winged helix cell cycle-controlling factors, DP
    548888 (tfdp1)
Chromosome and associated proteins [BR:xtr03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     548888 (tfdp1)
SSDB
Motif
Pfam: DP E2F_TDP alpha-hel2 FMP23
Other DBs
NCBI-GeneID: 548888
NCBI-ProteinID: NP_001011211
Xenbase: XB-GENE-1219073
UniProt: Q5M8Z8
Position
2:complement(115815845..115843103)
AA seq 411 aa
MAKDVGLIEANGELKVFVDQNLSPEKGVVSLLTVHPSSVSSIGKQLLPKTFGQSNVNITQ
QVVLGTPQRQSAPNTILIGSPHTPNTHFVSQNQVTDSSPWSAGKRNKKGEKNGKGLRHFS
MKVCEKVQKKGTTSYNEVADELVAEFSSADNHISPNESQAYDQKNIRRRVYDALNVLMAM
NIISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQR
NRLTEQKANRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEV
LKRMGMACGLESGSCSAEDLKTARSLVPKALEPYVTEMAQGSISSVYISSSSGSVSNGRR
FSSSDLTGCTDSMLATSSNGSQYSSSRVETPVSYVGEEDDDDEDDFNDDDD
NT seq 1236 nt   +upstreamnt  +downstreamnt
atggcaaaagatgttggtcttatagaagcaaatggagaacttaaggtttttgtagaccag
aatcttagccctgagaaaggtgtagtgtcattattgactgtccatccatcatcagtcagt
tccattggaaaacagctgctgccgaaaacgtttggacagtccaatgtaaacattactcag
caagtggttcttgggacaccacagagacagtctgcaccaaatactatacttataggaagt
cctcatacgcctaatacacattttgtatcacagaaccaagttacagactcttcaccatgg
tctgctggaaaaagaaataaaaaaggtgaaaagaatggcaaaggtttgcgtcatttctcc
atgaaggtttgtgagaaggtgcagaagaaaggcacaacgtcttacaatgaagtagctgat
gaactggttgcagaatttagttcagcagataatcatatatctccgaatgaatctcaagca
tatgaccagaaaaatattagacgacgagtctatgatgccttaaatgtgcttatggctatg
aacataatttctaaagaaaagaaggaaataaagtggattggtttacctacaaactctgct
caggaatgtcaaaatttagaggttgaaagacaaagaagacttgaacgaataaagcaaaag
caatctcagctacaagaacttatactacagcaaattgctttcaaaaacctagttcagaga
aatcgtcttacagaacaaaaagcaaacagaccacccccaccaaattcagtcatacattta
cccttcatcattgtgaacaccagcaagaagacagtgattgactgtagcatttctaatgac
aagtttgaatacttatttaattttgacaacacatttgaaatacatgatgatattgaagta
ctgaagcgaatgggaatggcttgtggcctagaatcaggaagctgttcagctgaggacctt
aagactgcgagaagcttggtgccaaaagctctagaaccatatgtgacagaaatggctcag
ggatcaattagcagtgtgtatatctcatcttcatcaggttcagtgtctaatggcagaagg
ttttcatcaagtgacttgactggctgcacagatagcatgttagctacgagttcaaatgga
tcccagtacagcagttcccgagttgagactcctgtgtcgtacgttggagaggaagatgat
gacgatgaggatgattttaatgatgatgatgactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (9)   
   RefSeq(nuc) (3)   
   GenBank (3)   
   EMBL (3)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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