KEGG T01011: 549010

Xenopus tropicalis (western clawed frog): 549010

Entry

549010 CDS T01011

Gene name

ccnh, cak, p34, p37

Definition

cyclin H

Orthology

K06634

cyclin H

Organism

xtr Xenopus tropicalis (western clawed frog)

Pathway

xtr03022	Basal transcription factors
xtr03420	Nucleotide excision repair
xtr04110	Cell cycle

Module

xtr_M00290

Holo-TFIIH complex

Class

Genetic Information Processing; Transcription; Basal transcription factors [PATH:xtr03022]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:xtr03420]
Cellular Processes; Cell growth and death; Cell cycle [PATH:xtr04110]

SSDB

Motif

Pfam:

Cyclin_N Cyclin_C APP_E2

Other DBs

NCBI-GI:

NCBI-GeneID:

Xenbase:

UniProt:

Position

AA seq 323 aa
MYHNSTQRKHWTFLNDDEPQRLRAQANARYRAKIQAAEKARVSEIFNLETHEELVICKYY
EKRLLDFCNAFKPTMPKSVLGTACMYLKRFYLNNSVMEHHPRIIMLTCVFLACKVDEFNV
SSVQFVGNLGENPLGQEKILEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPM
LENPEMLRKSADEFLNRVALTDACLLFAPSVIALTAILSTASRAGLNMESYLTECLSLKE
NQETMSHLYDGMRRLKILVSKYEPARSDEVAVLKKRLENCHSTEVTLSINARKRKGYEDD
GYISKKPKTEEEEWTDEDFTDSL

NT seq 972 nt +upstreamnt +downstreamnt
atgtatcacaacagcacccagagaaagcactggacctttctgaatgatgacgagccgcag
cgcctgcgggcccaggctaatgccaggtatcgggccaagatacaggctgcggagaaggct
cgtgtctctgaaatatttaatctggaaacgcatgaggaattggtcatttgcaaatactac
gagaagagattgttggatttctgcaacgctttcaaacccacaatgccaaaatctgttctg
ggaacagcctgcatgtatttgaaacgcttctacctcaacaattcagtcatggaacatcac
ccaagaataataatgttgacctgtgtgttcttggcttgtaaagtcgatgaatttaatgta
tccagtgtccagtttgtcggcaacctaggagaaaacccgcttggccaggagaagattcta
gaacagatcttagaatatgaactgttactgatacagcagctgaatttccaccttatagtg
cacaatccttacagaccttttgaagggtttctaatagatctaaagactcgatatccaatg
ctggagaatccagaaatgttgagaaaatctgccgatgagtttctcaatcgtgttgcattg
accgatgcatgtttgctgtttgccccatcagtaatagccctcacggctatcttatcaact
gcctcacgtgccggattaaacatggaaagttatttaacagaatgtctctcgctaaaagaa
aatcaagaaaccatgtcacatctatatgatggcatgagacggctcaagatacttgtgagc
aaatatgaacctgccagatctgatgaagttgcagttttaaagaagaggctggagaattgc
catagtactgaagtcactttaagtattaatgcacggaagagaaaaggctatgaagatgat
ggctatatatcaaagaaacctaaaacagaggaggaagagtggactgatgaagactttaca
gattctctatag

All links

Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (3)   
   UniGene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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