KEGG   Xenopus tropicalis (tropical clawed frog): 549235
Entry
549235            CDS       T01011                                 
Symbol
rab11a
Name
(RefSeq) ras-related protein Rab-11A
  KO
K07904  Ras-related protein Rab-11A
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    549235 (rab11a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xtr04131]
    549235 (rab11a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xtr04147]
    549235 (rab11a)
   04031 GTP-binding proteins [BR:xtr04031]
    549235 (rab11a)
Membrane trafficking [BR:xtr04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab GTPases
    549235 (rab11a)
Exosome [BR:xtr04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   549235 (rab11a)
  Exosomal proteins of colorectal cancer cells
   549235 (rab11a)
GTP-binding proteins [BR:xtr04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab11/25 [OT]
    549235 (rab11a)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU RsgA_GTPase AAA_22 PduV-EutP ABC_tran AAA_16 AAA_14 Gtr1_RagA FeoB_N NTPase_1 TniB AAA_24 SRPRB AAA_5 AAA_21 YtzH
Other DBs
NCBI-GeneID: 549235
NCBI-ProteinID: NP_001016481
Xenbase: XB-GENE-489346
UniProt: Q28HH1
Position
3:116826231..116837659
AA seq 216 aa
MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNKIVIM
LVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQTQ
MSDRRENDMSPSNNVVPIHVPPTTENKPKMQCCQNI
NT seq 651 nt   +upstreamnt  +downstreamnt
atgggtaccagggacgacgaatacgattatctgtttaaagtggttctgatcggagactcc
ggtgtggggaagagtaatctcttgtccagattcacacgcaatgagtttaacctggagagt
aagagcaccatcggggtggaatttgctacaagaagcatccaggtggatggcaaaaccatt
aaagctcagatctgggacacagctggacaggagcgataccgggccatcacttcagcgtat
taccgaggagctgtgggggcactgctggtgtatgacattgccaagcacttgacctatgag
aatgtggaacgatggctaaaggaattaagggaccacgcagacaataaaatagttatcatg
ttggtgggcaacaagagtgacctgcgacacttgagggctgtaccaactgatgaagcccgt
gcatttgcagaaaagaatgggttgtcctttatagaaacctctgcactggattcaacaaat
gtggaagctgctttccagactatactcacagagatctaccgcattgtgtcccagacgcag
atgtcagacagacgtgagaatgacatgtccccaagtaacaatgtggtccccatccacgtg
ccccccaccactgaaaataaaccaaagatgcaatgctgtcagaacatctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (20)   
   Pfam (20)   
All databases (38)   

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