KEGG   Xenopus tropicalis (tropical clawed frog): 549591
Entry
549591            CDS       T01011                                 
Symbol
myd88
Name
(RefSeq) myeloid differentiation primary response protein MyD88
  KO
K04729  myeloid differentiation primary response protein MyD88
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04010  MAPK signaling pathway
xtr04620  Toll-like receptor signaling pathway
xtr04621  NOD-like receptor signaling pathway
xtr05132  Salmonella infection
xtr05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    549591 (myd88)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    549591 (myd88)
   04621 NOD-like receptor signaling pathway
    549591 (myd88)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    549591 (myd88)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    549591 (myd88)
SSDB
Motif
Pfam: Death TIR_2 TIR
Other DBs
NCBI-GeneID: 549591
NCBI-ProteinID: NP_001016837
Xenbase: XB-GENE-486650
UniProt: Q28DJ2 A0A8F2WAP5
Position
6:complement(7349723..7362273)
AA seq 283 aa
MACGSSLGSVDMNSIPLVALNYNVRHRLSLYLNPNAVVAAGWTQLAEEMGYDYLEIKNFE
RFPDCTMKLLEDWEKKCFRATVGGLLEMLKKMERNDILTDLGPLIEADCMKHLEKKNAPL
PLQDDKVDSSEQYRITKSDDPSGSLPETFDAFICYCAQDISFVQEMISRLEQTDYKLKLC
VFDRDVLPGTCLWSITSELIEHRCRKMVVIISDDYLDSSECDFQTKFALSLGPGAREKRL
IPVKYKPMKRPFPSILRFITLCDYTNPCTKGWFWERLAKALSR
NT seq 852 nt   +upstreamnt  +downstreamnt
atggcctgtgggagcagcttggggagtgtcgacatgaactccatccccctcgtggcacta
aattacaacgtccggcacaggctctccctgtatctcaaccctaatgccgtggtggccgct
ggctggactcaattggccgaggagatgggctacgactacctggaaatcaagaattttgag
cggttcccggactgcaccatgaagctgctggaagactgggagaagaagtgcttccgggcg
actgtgggggggctgctggaaatgctaaagaaaatggaaagaaacgatatcctgacggat
ctggggccgctcatcgaggccgactgcatgaagcacctggagaagaagaacgcgccgctg
ccattgcaagatgataaggtggacagcagcgagcaataccgaattaccaaaagcgacgat
cctagcgggagcctgcccgagacgttcgacgccttcatctgctactgcgcccaggatatc
tcgtttgtgcaggagatgatcagtcggctggaacagaccgattataaactcaagctgtgc
gtcttcgacagggacgtcctccccggaacctgcttgtggtccataaccagcgagctcata
gagcatcggtgccgaaagatggtggtgattatatctgatgattacctggacagcagcgag
tgtgactttcagaccaaatttgccctgagcctcggtccaggggctcgggagaagcggctc
attcctgtcaagtacaaaccgatgaagaggccatttcccagcatcctccgcttcatcact
ttgtgcgactacacaaacccctgcaccaagggctggttctgggagaggctcgccaaggcg
ttgagccgctaa

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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