KEGG   Xenopus tropicalis (tropical clawed frog): 549986
Entry
549986            CDS       T01011                                 
Symbol
gtf2i
Name
(RefSeq) general transcription factor II-I isoform X1
  KO
K03121  transcription initiation factor TFII-I
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    549986 (gtf2i)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xtr03021]
    549986 (gtf2i)
   03036 Chromosome and associated proteins [BR:xtr03036]
    549986 (gtf2i)
Transcription machinery [BR:xtr03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     549986 (gtf2i)
Chromosome and associated proteins [BR:xtr03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    BRAF-HDAC complex
     549986 (gtf2i)
SSDB
Motif
Pfam: GTF2I
Other DBs
NCBI-GeneID: 549986
NCBI-ProteinID: XP_031752835
Xenbase: XB-GENE-1217437
UniProt: A0A7D9NJZ2
Position
2:complement(100520189..100580434)
AA seq 948 aa
MARFQMPDLPVLNESSDHREAIKHFITAVESMCTEFAKIKAEVACIAVYDHETLIAGSEK
GRSFLDARKDFQKAFIQYCKLEEENTPQHHVIISSKAATDCAEIESLQKSVEDLFCICYG
KALGKSTPVPVPYDKMVRDPTAVSVTGLPKDVFVKDPSNYDLETVTQILHNRSQVSFSIK
RPFLDRRKSDEDAVTDYNDASVSESYNTVQVKTEPSEDSESSLELTTVTIKEEIDDQDYY
QFNFQGCGYGEESNEATEVEQREDSALQVPSETSEDPEVEVTIEDDEYIPPNKKPKSTEI
VNEPLQFKRKTREFNFEKWNARITELRKQVEELFEKKYAQAINVTGPVAIPYHLFQSNTE
DLYVEGLPEGIPFRRPSTYGIPRLERILLARERIRFVIKKHDLLNARDVMPLEKPNTGVK
EEWYARITKLRKIVDQLFSKKFAEALGKTEAMSVPYQKFEANPAEMYVEGLPDNIPFRSP
SWYGIPRLEKIIQVGNRIKFVIKKPELLTQSVAESMQNRTNSGVKEDWNVRITKLRKQVE
EIFNTKFAQALGLPEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGS
AKIKFIVKKPQLVATHIPSELVNKINIDVSQSTESGSNPASKPPEAAVDVDTSKSCIRTT
PAQTNGSSMPFKPRGREFSFEAWNAKITDLKQKVEALFDEKCGEALGLNEPYKVPFALFE
SYPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNRAKIKFVIKKPEMIENTAKEQPPNFA
PKKAGIQNNAHTASGLEDLNIIQVTIPDADNEKNVKVDKARQLREQVNELFSKKFGEAIG
MNFPVKVPYRKITTNPGCVVVDGMPPGVSFKAPSYLEMSSMRRILDSAEFIKFTVIRPFP
GLVLNNQESESGQSAENADRSQTDEAAEEGSKDTQDLSLIKQEPDPTW
NT seq 2847 nt   +upstreamnt  +downstreamnt
atggcccgtttccagatgcctgacttaccagtcctaaatgagtcttctgaccacagagaa
gctatcaagcactttattactgcagtggagtcaatgtgtacagagtttgccaaaatcaag
gcagaagtagcatgtatcgctgtgtacgatcatgaaacgctaatagctggcagtgaaaaa
ggaagatcctttttagatgcaagaaaggatttccagaaagcctttattcagtactgcaag
ttggaggaagagaacaccccacaacatcatgtcattataagttctaaggcagcaacagac
tgtgcagaaatagaatctctccaaaagtctgtggaggacttgttttgtatttgctatggc
aaagctttaggaaaatcaaccccagtgcctgtgccatatgacaagatggtaagagaccca
actgcagtctcagtaactggacttcccaaggatgtatttgttaaagatccatctaactat
gaccttgagactgtaacccagatattacacaacagatcgcaagtgtcattctctattaaa
agaccttttcttgataggaggaaatcggatgaggatgcggttacagattataatgatgcc
tctgtctctgagagctacaatactgtgcaagtgaaaactgagcccagtgaagattctgaa
agttcacttgagttgaccactgtcactataaaggaagaaattgacgatcaagactactat
cagtttaatttccaaggttgtggatatggtgaagagtccaatgaagcaactgaagtggag
caaagagaagattcagctctgcaagtaccttctgaaacaagtgaggacccagaagttgag
gtcactatagaagatgatgagtacattccacctaataagaagccaaagagcacagaaatt
gtcaatgaaccacttcaatttaaacgaaaaacccgggagtttaactttgaaaagtggaat
gctagaattacagagttaagaaagcaagtggaagaattatttgagaaaaaatatgctcaa
gctattaatgtgactggtcctgtcgcaatcccatatcacctttttcagtccaatactgaa
gatctgtatgttgaaggtttaccagaaggaattccattcagaaggccttcaacctatgga
attccacgcctcgaaaggatattgctagcaagggaaaggatacgatttgtcattaaaaag
catgatttgctaaatgcaagagatgttatgccgcttgaaaagcccaacacaggagtgaaa
gaagaatggtatgctagaataacgaaattaagaaaaatcgttgatcagttgttcagtaaa
aaatttgctgaggccttaggcaaaacagaggctatgtctgtgccataccagaaatttgaa
gcaaaccctgctgaaatgtatgtggaagggttgcctgataatattccattccgtagccct
tcctggtatggaattccaagactggaaaagataattcaggttggcaacaggatcaaattt
gtgattaaaaaaccagaattgctgactcagtctgtagctgaatcaatgcaaaacagaaca
aattcaggagtgaaagaagactggaatgtgaggattactaaattaagaaagcaggtagag
gagatcttcaatacaaaatttgcacaagcactgggacttcctgaagcagtaaaagtccct
tatccagtatttgagtctaacccagagttcctgtatgtcgaaggattgcctgaaggaatt
cccttccggagccccacatggtttgggatacctcggctagagagaattgttcgaggaagt
gcgaaaattaaatttatagttaagaaacctcagctggttgcaacacacattccttctgaa
ttggtcaacaaaataaatattgatgtgtcacaatctacagagagcggaagcaatccagca
agtaagccacccgaggcagcagttgatgttgatacctcaaaatcatgcatacggacgact
cctgcccagactaatggttccagtatgcctttcaaaccccggggaagagaattttctttt
gaggcgtggaatgccaaaattacagacttgaaacaaaaagtagaagccctgtttgatgag
aaatgtggggaggcacttggtcttaatgaaccctataaggttccttttgcattgtttgaa
tcatacccagaagatttctacgtggaagggcttcctgagggtgttcccttccgccggccg
tccacatttggtatccctagacttgagaagattctcagaaacagggcaaaaattaaattt
gttattaaaaaacctgaaatgattgaaaacactgccaaagaacagcctccaaactttgca
ccaaaaaaggcaggaattcagaacaatgcacatacagcttctggacttgaagatctgaat
ataatccaagtgacaataccagatgcagacaatgaaaaaaacgttaaagtagacaaagcc
cgacagctgagggagcaagtcaatgaactgttcagtaagaagttcggagaagccattggc
atgaactttccagtaaaagtcccttacaggaaaattacaactaacccaggatgtgtggta
gttgatggaatgcctcctggagtttcattcaaagcccccagttaccttgaaatgagttct
atgcgtaggattctggattcagctgaatttattaagtttacagttataaggccttttcca
gggctggttcttaacaaccaagaaagtgaatccggacagtcagcagaaaatgctgacaga
agtcaaacagatgaagctgcagaagaaggatcaaaagacacacaagacttaagtcttata
aaacaagaaccagatcccacgtggtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (19)   
   RefSeq(nuc) (7)   
   GenBank (6)   
   EMBL (6)   
Protein domain (1)   
   Pfam (1)   
All databases (36)   

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